Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 810 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC101

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 494/804 (61%), Positives = 625/804 (77%), Gaps = 23/804 (2%)

Query: 1   MDKKSLSERDICSKYIAPAIQHAGWDMHKQVREEVSFTKGRIMVRGKLHSRGEARRADFI 60
           ++  +L+E DI +K + PAI +AGWD   Q+R+EV    G+++VRGK+ +R   + AD +
Sbjct: 4   LNLSNLTEADIITKCVMPAILNAGWDNTTQIRQEVKLRDGKVIVRGKVAARRTVKSADIV 63

Query: 61  LYHQANLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTDSK- 119
           LYH+  +P+AVIEAK NKH +G GMQQ + YA  LDVPFVF++NGDGF+F D +  + + 
Sbjct: 64  LYHKPGIPLAVIEAKANKHEIGKGMQQGIEYARLLDVPFVFATNGDGFIFRDATAAEGEC 123

Query: 120 VETELSLDQFPSPAELWHRYCQWKGLDNAVQHKIEAPYYDDGSGRMPRYYQMNAINRTVE 179
           +E +++LD FPSPAELW ++C WKG   A    I   YYDDGSG+ PRYYQ+ AIN+T+E
Sbjct: 124 LEKQITLDDFPSPAELWQKFCLWKGYTQAQLPVITQDYYDDGSGKSPRYYQLQAINKTIE 183

Query: 180 AVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPF 239
           AV+ GQ+RVLLVMATGTGKTYTAFQIIWRLWKSK KKRILFLADRNILVDQTKNNDF+PF
Sbjct: 184 AVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNILVDQTKNNDFQPF 243

Query: 240 GQAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFDLIVIDECHRGSAAED 299
           G AMTK++ R ID +YEI+L+LYQA+TG EE+   +KQ + DFFDLIVIDECHRGSA+ED
Sbjct: 244 GTAMTKVSGRTIDPAYEIHLALYQAITGPEEDQKAFKQVAPDFFDLIVIDECHRGSASED 303

Query: 300 SAWREILGYFSNATHVGLTATPKETKEVSSITYFGEPVYSYTLKQGIEDGFLAPYKVVRI 359
           SAWREIL YFS+AT +GLTATPKET EVSS  YFG+PVY Y+LK+GIEDGFLAPYKVVR+
Sbjct: 304 SAWREILDYFSSATQIGLTATPKETHEVSSTDYFGDPVYVYSLKEGIEDGFLAPYKVVRV 363

Query: 360 DFDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIETRTQLVAQKVTEFLKASDPF 419
           D D DLQGWRP KG  D NGE+I+DRIYN KD DRT+VI+ RT+LVA+ +T++LK ++P 
Sbjct: 364 DIDVDLQGWRPTKGQTDLNGEVIDDRIYNQKDFDRTMVIDERTELVARTITDYLKRTNPM 423

Query: 420 QKTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYP 479
            KTIVFC+DI+HAERMR+ALVNLNPE+V +N KYVM+ITGDD+ GKA+LDNFINP++ YP
Sbjct: 424 DKTIVFCNDIDHAERMRRALVNLNPEQVKKNDKYVMKITGDDEIGKAQLDNFINPKKPYP 483

Query: 480 VIATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKA 539
           VIATTS+LMTTGVDA+TCKL+VLDQ+I+SMT+FKQIIGRGTRI+E +GK WFTI+DFKKA
Sbjct: 484 VIATTSELMTTGVDAKTCKLVVLDQNIQSMTKFKQIIGRGTRIDERYGKLWFTILDFKKA 543

Query: 540 TELFADPAFDGDPVVVYAPEGNELPVPPDDLLEG-DGISAGSD----------------G 582
           TELFAD  FDG P  V      ++  P  D  E  + IS   D                 
Sbjct: 544 TELFADERFDGIPEKVMDTTPEDIADPESDFEEKLEEISEHDDEQVTGVDEPPAPPYQVK 603

Query: 583 ESDDLDFTGEEDGKKLIKYVIDSIPIYVIAERVQYYGPDGRLITESLHDYTRTCVQKQFA 642
           ++DD+    EED KK+ K+ ++ + + VIA+RVQYY  DG+L+TES  DYTR  + K++A
Sbjct: 604 DTDDVGPLPEEDEKKIRKFHVNGVAVGVIAQRVQYYDADGKLVTESFKDYTRKTLLKEYA 663

Query: 643 SLDDFLRHWSDAEQKKVIIDEMAAQGVMWEALAEEVEKKQGKPLDPFDLICHVAFDQPPL 702
           SLDDF R W DA++K+ II E+  QG++WE LAEEV    GK LDPFD++CHV + QPPL
Sbjct: 664 SLDDFTRKWQDADRKEAIIHELEQQGIIWEVLAEEV----GKDLDPFDMLCHVVYGQPPL 719

Query: 703 SRKERAEQVKKRNYFAKYSGAARQVLEALLDKYADTGIEHIEDIKILQLDPFNQLGAPIE 762
           +RKERAE V+KRNYF KYS AA+ VL+ LLDKYAD G++ IE I++L+L PF+ +G   E
Sbjct: 720 TRKERAENVRKRNYFTKYSEAAQAVLDNLLDKYADAGVQEIESIQVLKLKPFDSMGTLPE 779

Query: 763 LVK-AFGGKAGYNKAIHELEDALY 785
           ++K  FG + GYN+A+ ELE+ +Y
Sbjct: 780 IIKTGFGDRNGYNQALSELENEIY 803