Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 586 a.a., Putative DNA repair helicase RadD from Escherichia coli ECRC100

 Score = 71.2 bits (173), Expect = 1e-16
 Identities = 104/418 (24%), Positives = 179/418 (42%), Gaps = 81/418 (19%)

Query: 167 RYYQMNAINRTVEAVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNI 226
           R YQ  A++ T+    R +   ++V+ TG GK+    ++  RL     + R+L LA    
Sbjct: 6   RPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELA-RL----ARGRVLVLAHVKE 60

Query: 227 LVDQTKNNDFKPFGQAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFDLI 286
           LV Q  +  ++  G      A        +   S  + V G+ + +       +  F L+
Sbjct: 61  LVAQ-NHAKYQALGLEADIFA-----AGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLL 114

Query: 287 VIDECHRGSAAEDSAWREILGYFSNATH----VGLTATPKETKE--VSSITYFG------ 334
           ++DECHR    E+S +++IL + +        +GLTATP    +  +    Y G      
Sbjct: 115 IVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDE 174

Query: 335 -----EPVYSYTLKQGIEDGFLAP-----YKVVRIDFDKDLQGWRPPKGMLDKNGELIED 384
                + +Y   L+  I+ G+L P       VV+ DF + LQ           NG     
Sbjct: 175 KALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSR-LQA--------QSNG----- 220

Query: 385 RIYNLKDMDRTLVIETR-TQLVAQKVTEFLKASDPFQKTIVFCDDINHAERMRQALVNLN 443
            +++  D++R L  + R T  +  ++ EF       +  ++F   + HA+     +V L 
Sbjct: 221 -LFSEADLNRELKKQQRITPHIISQIMEFAATR---KGVMIFAATVEHAKE----IVGLL 272

Query: 444 PERVAENRKYVMRITGDDQEGKAE--LDNFINPEERYPVIATTSKLMTTGVDAQTCKLIV 501
           P   A        ITGD    + +  +++F     RY V      ++TTG DA    LI 
Sbjct: 273 PAEDA------ALITGDTPGAERDVLIEDFKAQRFRYLV---NVAVLTTGFDAPHVDLIA 323

Query: 502 LDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKATELFADPAFDGDPVVVYAPE 559
           + +  +S++ ++QI+GRG R+    GK    I+D+             G+P  +YAPE
Sbjct: 324 ILRPTESVSLYQQIVGRGLRLAP--GKTDCLILDYA------------GNPHDLYAPE 367