Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 586 a.a., Putative DNA repair helicase RadD from Escherichia fergusonii Becca

 Score = 75.5 bits (184), Expect = 8e-18
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 85/420 (20%)

Query: 167 RYYQMNAINRTVEAVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNI 226
           R YQ  A++ T+    R +   ++V+ TG GK+    ++  RL +     R+L LA    
Sbjct: 6   RPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELA-RLARG----RVLVLAHVKE 60

Query: 227 LVDQTKNNDFKPFGQAMTKIAR--RQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFD 284
           LV Q  +  ++  G      A   ++ ++  ++     Q+VT     ++ ++      F 
Sbjct: 61  LVAQN-HEKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVT---RNLDAFQ----GEFS 112

Query: 285 LIVIDECHRGSAAEDSAWREILGYFSNATH----VGLTATPKETKE--VSSITYFG---- 334
           L+++DECHR    E+S +++IL + +        +GLTATP    +  +    Y G    
Sbjct: 113 LLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRG 172

Query: 335 -------EPVYSYTLKQGIEDGFLAPYK-----VVRIDFDKDLQGWRPPKGMLDKNGELI 382
                  + +Y   L+  I+ G+L P +     VV+ DF + LQ           NG   
Sbjct: 173 DEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSR-LQA--------QSNG--- 220

Query: 383 EDRIYNLKDMDRTLVIETR-TQLVAQKVTEFLKASDPFQKTIVFCDDINHAERMRQALVN 441
              +++  D++R L  + R T  +  ++ EF       +  ++F   + HA+     +V 
Sbjct: 221 ---LFSEADLNRELKKQQRITPHIISQIMEFAATR---KGVMIFAATVEHAKE----IVG 270

Query: 442 LNPERVAENRKYVMRITGDDQEGKAE--LDNFINPEERYPVIATTSKLMTTGVDAQTCKL 499
           L P   A        ITGD    + +  +D+F     RY V      ++TTG DA    L
Sbjct: 271 LLPAEDAA------LITGDTPGSERDVLIDDFKAQRFRYLVNVA---VLTTGFDAPHVDL 321

Query: 500 IVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKATELFADPAFDGDPVVVYAPE 559
           I + +  +S++ ++QI+GRG R+    GK    I+D+             G+P  +YAPE
Sbjct: 322 IAILRPTESVSLYQQIVGRGLRLAP--GKTDCLILDYA------------GNPHDLYAPE 367