Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  361 bits (926), Expect = e-104
 Identities = 224/549 (40%), Positives = 320/549 (58%), Gaps = 10/549 (1%)

Query: 7   IHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTDKADILA 66
           + ++ IV+ L+LE+  G  V+TGETGAGKSI++DAL LALG R+DSGVVR G  + DI A
Sbjct: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60

Query: 67  TFDLVDIPEAHT-WLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKALGELLI 125
            FD    P + T WL E+    E   +LRR +  EGRSR +ING+   +  LKAL + L+
Sbjct: 61  EFDA---PASLTPWLEEQGFPVEDGLLLRRTVDTEGRSRAWINGSAATVTQLKALADGLV 117

Query: 126 DIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNSGDEQRA 185
           DIH QH  QSL + +  R LLD YAG +D A   +  A+ W Q R  L+  +   +  + 
Sbjct: 118 DIHGQHAWQSLTRAEAVRDLLDAYAG-IDTAPAARAWAQ-WRQRRKALDSATEKQNSLQQ 175

Query: 186 RHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDSGNVLSA 245
             + L++Q+ ELD L     E E+L  +H  L +A+ L     Q+     + D  N  + 
Sbjct: 176 ESERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAA-QIAANALDEDDTNAAAL 234

Query: 246 LTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRLQALEERL 305
           +  +L+ L A  +     + A   + +A  QV++ V  L+++  + + DP  L+AL++RL
Sbjct: 235 IHRALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTERDPGSLEALDQRL 294

Query: 306 DTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHYKEKARELS 365
               +LAR++R  P EL  +  Q   EL  ++ + + +E L     A  + +    + +S
Sbjct: 295 SLWVSLARRYRRTPEELAEVHAQWKTELAQIDQALD-LEALQRAERADWKTFATALQAIS 353

Query: 366 GLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLVSANPGQPL 425
             RQ+AA +L+ AV   +Q LGM GG F + L   E  E   HG EQ+E  V+ + G   
Sbjct: 354 KERQKAAPKLSKAVTATMQTLGMQGGVFEVALLPLE--EPQAHGAEQVEFRVAGHAGATP 411

Query: 426 KALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQLLRRLGERG 485
           K + KVASGGELSRI+LAI V+T++  + PTL+FDEVD GIGG  A  VGQLLR+LG+  
Sbjct: 412 KPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQLGKDR 471

Query: 486 QVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGGIDLTKESL 545
           QVL VTHLPQVAA   HHL V K      T + V  +    RV E+ARMLGG + ++ SL
Sbjct: 472 QVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQSEISL 531

Query: 546 AHARKMVVS 554
           AHAR+M+ +
Sbjct: 532 AHAREMLAA 540