Pairwise Alignments

Query, 378 a.a., Carbamoyl-phosphate synthase small chain from Pseudomonas putida KT2440

Subject, 399 a.a., Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) from Variovorax sp. SCN45

 Score =  507 bits (1305), Expect = e-148
 Identities = 253/383 (66%), Positives = 298/383 (77%), Gaps = 8/383 (2%)

Query: 4   PAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNT 63
           PAILALADG++F+G +IGA G T GEVVFNTAMTGYQEILTDPSY QQIVTLTYPHIGN 
Sbjct: 11  PAILALADGTVFQGNSIGAAGSTTGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHIGNY 70

Query: 64  GTTPEDAESSRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILR 123
           G   ED E+ ++ +AGL+I+DLPL+ASN+R T +L EYL + N VAIA IDTR+LTR LR
Sbjct: 71  GVNGEDIEADKIHAAGLIIKDLPLVASNFRKTATLTEYLVSGNTVAIANIDTRKLTRHLR 130

Query: 124 EKGAQNGCILA---GDNISE---EAAIAAARGFPGLKGMDLAKVVSTKERYEWRSSVWEL 177
             GAQNGCIL    G+ +++   + AIAAA+  P + G+DLAKVVS  + YEW  + W+L
Sbjct: 131 THGAQNGCILGLAEGETVTQALIDKAIAAAKAAPSMAGLDLAKVVSVTQTYEWTETEWKL 190

Query: 178 -KTDSHPTIDAADLP-YHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDG 235
              +  P       P +HVVAFDYGVK NILRM+  RG R+TVVPAQTPA++VL L PDG
Sbjct: 191 VNLNGKPGYGVQITPKFHVVAFDYGVKKNILRMIAQRGARITVVPAQTPAADVLKLKPDG 250

Query: 236 VFLSNGPGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASGAKTVKMGHGHHGANH 295
           +FL+NGPGDPEPCDYAI A+KE++ET IP FGICLGHQ++ALASGAKT KM  GHHGANH
Sbjct: 251 IFLANGPGDPEPCDYAISAVKELIETGIPTFGICLGHQIMALASGAKTFKMKFGHHGANH 310

Query: 296 PVQDLDTGVVMITSQNHGFAVDEATLPGNVRAIHKSLFDGTLQGIERTDKSAFSFQGHPE 355
           PV+DLD G V ITSQNHGFAVDE +LP N+R  H SLFD TLQG+ RTDK AF FQGHPE
Sbjct: 311 PVKDLDNGRVSITSQNHGFAVDEKSLPANLRPTHVSLFDNTLQGLARTDKPAFCFQGHPE 370

Query: 356 ASPGPTDVAPLFDRFTDAMAKRR 378
           ASPGP D+  LFDRFT  M K +
Sbjct: 371 ASPGPHDIGYLFDRFTALMEKHK 393