Pairwise Alignments

Query, 1076 a.a., Carbamoyl-phosphate synthase large chain from Pseudomonas putida KT2440

Subject, 627 a.a., 3-methylcrotonyl-CoA carboxylase from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 6e-13
 Identities = 96/417 (23%), Positives = 164/417 (39%), Gaps = 64/417 (15%)

Query: 33  GAQACKALREE---GFRVILVNSNPATIMTDPAMAD-ATYIEPIKWQ----SVAKIIEKE 84
           G  AC+  R     G+R + V S+         MAD A +I P   Q    ++  I+   
Sbjct: 13  GEIACRIQRTAQALGYRTVAVYSDADAQALHVQMADEAVHIGPAPVQQSYLNIDAILNAA 72

Query: 85  RPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGL 144
           R  +      G   L+   D  R    ++ G+  IG + + I+    +     AM D G+
Sbjct: 73  RVTSADAIPPGYGFLSENPDFAR--ACQQAGLTFIGPSPEAIELMGSKRLSKLAMLDAGV 130

Query: 145 ECPRS--GIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEIC----TRG 198
            C     G A          + +G+P +I+ S   GG G  +  + EE  +      +  
Sbjct: 131 PCIAGYQGSAQDDSTLQREADAIGYPLMIKASAGGGGRGMRLVQHPEELLDNLHTARSEA 190

Query: 199 LDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIV----CSIENFDPMGVHTGDSITVA 254
            +   + EL+++++LI  +  E+++  D   + I +    CSI+            I  A
Sbjct: 191 KNAFGSGELILEQALIDPRHVEIQLFGDSHGHLIYLGERDCSIQR------RHQKIIEEA 244

Query: 255 PAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNPRVSRSSALA 314
           P   +T +  Q M  A+L   R +    G   V+F +    GR   +EMN R+     + 
Sbjct: 245 PCPVMTPELRQAMGEAALNAGRAVNY-VGAGTVEF-LLDRNGRFYFLEMNTRLQVEHPVT 302

Query: 315 SKATGFPIAKIAAKLAIGYTLDELQNDIT----------GGRTPAS-----------FEP 353
              TG  +     ++A G  L   Q D++              PA            ++P
Sbjct: 303 ELITGLDLVDWQLQIAAGQPLPLTQPDVSLNGHAMEVRLYAEDPAQGFLPQTGEVLRWDP 362

Query: 354 S----IDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLE 406
           +    ID+ VT+  R +    P  D  L       G+++A G T +E+ +K LR +E
Sbjct: 363 AAGVRIDHGVTEGQRIS----PFYDPML-------GKIIAYGATREEARRKLLRAVE 408



 Score = 53.9 bits (128), Expect = 4e-11
 Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 41/310 (13%)

Query: 595 GYETIMVNCNPETVSTDYDTSDR-LYFEP-------LTLEDVLEVCRVEKPKGVIVHYG- 645
           GY T+ V  + +  +     +D  ++  P       L ++ +L   RV     +   YG 
Sbjct: 27  GYRTVAVYSDADAQALHVQMADEAVHIGPAPVQQSYLNIDAILNAARVTSADAIPPGYGF 86

Query: 646 -GQTPLKLARALEEAGVPIIGTSPDAIDRAEDRE--RFQQMVQRLSLLQPPNATVRSEEE 702
             + P   ARA ++AG+  IG SP+AI+    +   +   +   +  +     + + +  
Sbjct: 87  LSENP-DFARACQQAGLTFIGPSPEAIELMGSKRLSKLAMLDAGVPCIAGYQGSAQDDST 145

Query: 703 AIRAAGSIGYPLVVRPSYVLGGRAMEIVYE----LDELKRYLREAVQVSNDSPVLLDHFL 758
             R A +IGYPL+++ S   GGR M +V      LD L     EA        ++L+  L
Sbjct: 146 LQREADAIGYPLMIKASAGGGGRGMRLVQHPEELLDNLHTARSEAKNAFGSGELILEQAL 205

Query: 759 NCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLP--PYSLSKE-----VQDEV 811
                +++         + G    H+    ++ G+  CS+      + +E     +  E+
Sbjct: 206 IDPRHVEIQ--------LFGDSHGHL----IYLGERDCSIQRRHQKIIEEAPCPVMTPEL 253

Query: 812 RVQVKKMALELG----VVGLMNVQLAL-QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMI 866
           R  + + AL  G     VG   V+  L +  + Y +E+N R     P      G  L   
Sbjct: 254 RQAMGEAALNAGRAVNYVGAGTVEFLLDRNGRFYFLEMNTRLQVEHPVTELITGLDLVDW 313

Query: 867 AARVMAGKTL 876
             ++ AG+ L
Sbjct: 314 QLQIAAGQPL 323