Pairwise Alignments

Query, 493 a.a., transcription termination/antitermination L factor from Pseudomonas putida KT2440

Subject, 538 a.a., N-utilization substance protein A from Agrobacterium fabrum C58

 Score =  422 bits (1086), Expect = e-122
 Identities = 215/479 (44%), Positives = 324/479 (67%), Gaps = 6/479 (1%)

Query: 4   EVLLVVESVSNEKGVPPGVIFEALEVALATATKKRFEDEVDLRVEINRHTGSYETFRRWT 63
           E+L + ++V+ EK +   ++  A+  A+  A + R+  E ++R +IN  TG     R   
Sbjct: 9   ELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGSETNIRADINSKTGEIRLQRLLE 68

Query: 64  VVDEADLDDPAIETWLDKIKDTHPEAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKVREA 123
           VV+ A+  D + +  L+  +D +P+AK+GD I + +  ++FGRIAAQ+AKQVIVQKVREA
Sbjct: 69  VVEAAE--DYSTQIPLELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVREA 126

Query: 124 ERAQVVDAYRERVGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGVRLRA 183
           ER +  D +++R+GEI++GTVK+V   NVIVDLG   E ++ R+++IPRE  R G R+RA
Sbjct: 127 ERDRQYDEFKDRIGEIVNGTVKRVEYGNVIVDLGRG-EGIIRRDEMIPRENMRYGDRVRA 185

Query: 184 LLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAVRSK 243
            + ++R E RGPQ+ LSRT PQ +++LF +EVPEI +G+I++ + +RDPGSRAKIAV S 
Sbjct: 186 YVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVISN 245

Query: 244 DKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIVDED 303
           D  IDP GAC+GMRGSRVQAV GEL GE++DI+ W   PA F++NA+ PAEVA +++DE+
Sbjct: 246 DSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSQEPASFIVNALQPAEVAKVVLDEE 305

Query: 304 AHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEKDIQAKQQAETGDILRNFIE 363
           +  +++ V ++ L+ AIGR GQNVRLASQLTGW +++MTE++   ++Q E  +    F+E
Sbjct: 306 SERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDIMTEQEESERRQKEFNERTALFME 365

Query: 364 ELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKAIAT 423
            L+VDE + QVL  EGF  +EE+AYV L+E+ +IDGFDED  +E++ RA++ L       
Sbjct: 366 ALDVDEMVGQVLASEGFAQVEELAYVDLDEITSIDGFDEDTADEIQTRAREYLERLEAEM 425

Query: 424 EEKLADAHPAEDLLSLEGMDKDLAAELAVRGVVNREDLAEQSIDDLLDIDGIDEERAGK 482
           + K  +    ++L  ++G+   +   L   G+   ED A  + DDL+   G  E + G+
Sbjct: 426 DAKRKELGVTDELRQIDGLTSQMMVALGEDGIKTIEDFAGCAADDLV---GWSERKDGE 481