Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 409 a.a., 2', 3'-cyclic nucleotide 2'-phosphodiesterase from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 7e-18
 Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 53/309 (17%)

Query: 57  YLVGGCVRDLMLGITPKDFD-VATSATPEQVRAEFRNARIIGRRFKL-VHVHFGREIIEV 114
           Y VGG VRD +LGI   D D V   A+ E++ A  +  + +G  F + +    G E    
Sbjct: 4   YKVGGAVRDRLLGIPVTDIDRVVVGASAEEMLA--KGYKPVGADFPVFLDPRNGDEYALA 61

Query: 115 ATFRAHHSEDDQGDAHRSSHNASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILD 174
            T R            +S     G +   +   TLEED  RRD TINA+  D     + D
Sbjct: 62  RTER------------KSGRGYGGFVFHASPEVTLEEDLIRRDLTINAMAEDD-DGNLTD 108

Query: 175 YANGVHDVRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAK---LDFGIEKHTYLPIRGLAP 231
             +G  D+  R+LR +   +  + EDP+R+LR  RFAA+   L F +   T   +R L+ 
Sbjct: 109 PYHGQRDLEGRILRHV---SPAFAEDPLRVLRVARFAARYAHLGFTVAPETLELMRQLSE 165

Query: 232 M--LREIPPARLFEECLKLFLSGQGAIAFEMLVDLELFEPLF-----------PASAHAL 278
              L  + P R ++E  +  +  Q  +  ++L + +  + L            PA+ H  
Sbjct: 166 SGELEALTPERSWKEISRALMEDQPQVFIQVLRECDALKTLMPEVDALFGVPQPAAHHPE 225

Query: 279 DERPTYTHTLISQ-ALNNTDLRVK-------QGKPVTPAFLFAALLWPALPARVLHLQNQ 330
            +   +T +++ Q AL+   L V+        GK  TP           LP  + H +++
Sbjct: 226 IDTGVHTLSVLEQAALHQQPLTVRWACLLHDLGKGTTP--------MDKLPQHIAH-EHR 276

Query: 331 GVPPIPAMN 339
           G+  I A+N
Sbjct: 277 GLKLIKAVN 285