Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 543 a.a., Poly(A) polymerase (EC 2.7.7.19) from Variovorax sp. SCN45

 Score =  320 bits (821), Expect = 6e-92
 Identities = 173/427 (40%), Positives = 256/427 (59%), Gaps = 28/427 (6%)

Query: 31  HSLQRHQFSRHAVNIVERLQSAGYQAYLVGGCVRDLMLGITPKDFDVATSATPEQVRAEF 90
           H +        A N+V  LQ AG++AY+VGG VRDL+LG+ PKDFDVAT+ATPEQV++ F
Sbjct: 34  HKIDPALVDERAKNVVTTLQQAGFEAYVVGGAVRDLLLGLRPKDFDVATNATPEQVKSLF 93

Query: 91  RNARIIGRRFKLVHVHFGR----EIIEVATFRAH-----------HSEDDQGDAHRSSH- 134
           R A IIGRRF++VHV +GR    E+IEV+TFRA+           +    +G+     H 
Sbjct: 94  RRAFIIGRRFRIVHVVYGRGREHEVIEVSTFRAYMDNTAAEQVSGNERTSKGELASMKHA 153

Query: 135 -NASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDVRNRLLRLIGDP 193
            +ASGR+LRDNV+G  EEDA RRDFT+NA+YYDP ++ ++DY NG+ D +   LR+IGDP
Sbjct: 154 VDASGRVLRDNVWGPQEEDAARRDFTVNAMYYDPANQVVVDYHNGIKDAQKLTLRMIGDP 213

Query: 194 THRYQEDPVRMLRAVRFAAK---LDFGIEKHTYLPIRGLAPMLREIPPARLFEECLKLFL 250
             RY+EDPVR++RA+RF+AK   L F +E  T  P+   + +L ++P +RLF+E LKL  
Sbjct: 214 ATRYREDPVRIIRAIRFSAKLAALGFKMEAKTAAPLVESSKLLADVPQSRLFDEMLKLLQ 273

Query: 251 SGQGAIAFEMLVDLELFEPLFPASAHALDERPTYTHTLISQALNNTDLRVKQGKPVTPAF 310
           +G      E L  L L + ++P     ++         +  AL +TD RV +GKPV P+F
Sbjct: 274 TGHAIATVEQLNKLGLSKGIYPLLDVVVERA---DQPFVKAALQDTDRRVGEGKPVAPSF 330

Query: 311 LFAALLWPALPARVLHLQ-----NQGVPPIPAMNGAAHDLIAEQCARIAIPKRFTLPIRE 365
           L A +LW  +       Q      +   P PA+  A  D+   +   ++   +    +RE
Sbjct: 331 LLACVLWADVRDGWAQRQEGQRGQRPQAPFPALQDAIDDVFNARIGDVSGRGKLAADMRE 390

Query: 366 IWDMQERLPRRSGKRADMLLDNPRFRAGYDFLLLRESAGEETDELGQWWTDYQDANDSER 425
           IW MQ R  +R+G     L++  RFRA +DF+ LR   GE ++ + +WW ++  A+D  R
Sbjct: 391 IWMMQPRFDKRTGSTPYSLVEQARFRAAFDFMRLRADVGEVSEAIAEWWQEFSIADDVRR 450

Query: 426 REMIREL 432
           ++++ ++
Sbjct: 451 QDLLEQV 457