Pairwise Alignments

Query, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  310 bits (793), Expect = 9e-89
 Identities = 192/475 (40%), Positives = 273/475 (57%), Gaps = 27/475 (5%)

Query: 3   HILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIATFDLIVSDLRLPGAPGTE 62
           +IL+V+DE  +   L   L +N  QV  AG+   A +       DL++SD R+PG  G  
Sbjct: 4   NILVVDDEPKLCDLLASALGQNDVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMDGPA 63

Query: 63  L---IKLGQG-TPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQN 118
           L   IK+     PV++MT+Y+++++AV SM+ GA DYIAKPFD DE+   VA+ L+ R  
Sbjct: 64  LLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQFRD- 122

Query: 119 APAAAPPAEPRASNGKATASDKGSAATANGEIGIIGSCQPMQDMYSKIRKVAPTDSNVLI 178
                  A  RA   +    D            ++G     + +   +  V  + + +L+
Sbjct: 123 --IMRDNARLRAELDEHAQFDS-----------LVGDSPAFRKVLQAVDSVRDSSATILL 169

Query: 179 QGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAG 238
            GESGTGKE+VARA+H    RA  P ++VNCAAIPE L+ESE+FGH KGAFTGA A R G
Sbjct: 170 TGESGTGKEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVG 229

Query: 239 LVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKN 298
             + AD GTLFLDE+G++PL  QA++LR LQE  I  VG  + +KVDVR+IAAT+++L +
Sbjct: 230 RFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLD 289

Query: 299 LAKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLARQSARIGRDDLHFSAEAEQ 358
                +FREDLYYRL+V  + LP+LRER  D+  +A  F    SA  G+    FSAEA Q
Sbjct: 290 AVANKEFREDLYYRLNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQ 349

Query: 359 AIRHYSWPGNVRELENAVERAVILSESAEISAELLGIDIELSDLDEDDILDNALVVANAG 418
           A+  Y WPGN+REL+N VERA I++ S  I       DI+L         +   V A   
Sbjct: 350 AMAAYHWPGNIRELQNCVERATIVAASPVIE------DIDLPGYLFASKPNQGDVTAILS 403

Query: 419 NASHEPTE-DLSLEDYFQHFVLE--HQDHMTETELARKLGVSRKCLWERRQRLGI 470
           +    P + D +L +  + ++L    + +  +   A K+G+S +  W R ++LGI
Sbjct: 404 DGPGIPQDLDAALAEVEKAYILAALQESNGVQAAAAAKIGISERSFWYRLKKLGI 458