Pairwise Alignments

Query, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1167 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  255 bits (652), Expect = 1e-71
 Identities = 281/1056 (26%), Positives = 461/1056 (43%), Gaps = 111/1056 (10%)

Query: 10   MILISAGYLMVLFGVAWISERGLIP---RSIIRHPLTYTLSLGVYASAWAFYGSVGLAYQ 66
            +I ++  Y+ +LF +A   +R L P   R   R P+ Y+LSL VY ++W F+GSVGLA  
Sbjct: 7    VIFVALAYIGLLFAIASYGDR-LRPGAGRGAAR-PMIYSLSLAVYCTSWTFFGSVGLATT 64

Query: 67   YGYGFLACYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLLAFRF-RSTWAGALTTIIM 125
             G+ FL  YLG      +   L   ++++ +   ++S+AD +A R+ ++    AL  I+ 
Sbjct: 65   QGFDFLTIYLGPIILMTVGAPLFLRVVRLAKANNITSIADFIAARYGKNQGIAALVAIVA 124

Query: 126  LIGVLPLLALQIQAVADSISILTGE--------PVKARVAFAFCTLIILFTIFFGSRHIA 177
            +I  +P ++LQ++AV+ S+  L G          +   +A      +  F I FG+RH  
Sbjct: 125  IIAAIPYISLQLKAVSASLVALLGHFAGEHGRGTLVGDLALFVACAMAAFAILFGTRHTD 184

Query: 178  TREKHEGLVFAIAFESVIKLLALGGIGLYALYGVFGGPHELEVWLLQNQTALAALHTPLQ 237
              E   GL+ AIA ES++KL A  G+GL   + +F GP  L  +  +  +A+A     L 
Sbjct: 185  ATEHQNGLMLAIATESLVKLAAFLGVGLLVTFVIFDGPFSL-WYAAREASAVAPFERGLS 243

Query: 238  EGPWRTLLLVFFASAIVMPHMYHMAFTENLNPRSLVSASWGLPLFLLLMSLAVPLVLWAG 297
               W T+ ++   + +++P  +H+A  EN     +  A W  PL+L+L++L V  +  AG
Sbjct: 244  LENWLTMTILSGGAFMLLPRQFHVAVVENKGESEIRRARWLFPLYLVLINLFVVPLALAG 303

Query: 298  LRLGA--STNPEYFTLGLGIAANNQALALLAYIGGLSAASGLIIVTTLALSGMALNHLVL 355
            + L      + + + L + +AA   +LALLA++GGLSAA+ ++IV  +A++ M  N LV+
Sbjct: 304  MTLFPLNLVDSDVYVLAVPLAAGFDSLALLAFVGGLSAATAMVIVECVAIAIMVSNDLVM 363

Query: 356  PLY------QPPAE--GNIYRWLKWTRRALIVAIITAGFMFYLSQNYHQSLANLGIVAFV 407
            PL       +P  E   ++   L   RR  I AI+   +++Y +    Q LA +G+++F 
Sbjct: 364  PLVLRRRAAKPEGEPREDMTGLLLMVRRISIFAIVLLAYLYYRTTGEAQ-LAQIGLLSFA 422

Query: 408  ATLQFLPGVLSVLYWPTANRRGFIAGLLAGTLVWMVTMLLPLL--------GNLQG--FY 457
            A  Q  P   + L W  A   G IAG++ G   W  T+++P L        G LQ   F 
Sbjct: 423  AIAQVGPAFAAGLIWQRATAAGAIAGIVVGGATWAYTLMMPSLAEAGLISAGVLQNGPFG 482

Query: 458  IPLLDMIYVLDDTSWHMA--AIASLAANVLLFTLISLFTNASTEEVSAAEACAVDNVRRP 515
            I LL    +L  T+  +A     SL  N L   ++S  T  S  E + A   A    R P
Sbjct: 483  ISLLRPTALLGLTAGPLAHGVAWSLGLNTLALVIVSFLTRPSQIERTQARLFAGTGDRPP 542

Query: 516  QR----RELHAASPQEFATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRI 571
             R    R   + S  E    + + LGA+ A+   +   R      D  R      +R   
Sbjct: 543  ARPAFLRWRSSVSLGELMATVERYLGAERARAAFDSYARQHGFALDTHREADAGMVR-HA 601

Query: 572  EANLSGLMGPSVAQDMVETFLPYKSGNENYVTEDIHFIESRLEDYHSRLTGLAAELDALR 631
            E  L+  +G + ++ ++   L  ++ +     +                  L  +  A  
Sbjct: 602  EHLLASAVGAASSRLVLSLLLRKRAVSTKAALK------------------LLDDASAAI 643

Query: 632  RYHRQTLQ----ELPMGVCSLAKDQEILMWNKAMEELTGIAAK-HVVGSRLVTI------ 680
            +Y+R+ LQ     +  G+    +D  ++ WN+   ++  +  + + VG  L  I      
Sbjct: 644  QYNRELLQSAIDHVRQGIAVFDRDLRLVCWNRQFGQMLDLPGECYAVGVPLTDILAAAPA 703

Query: 681  DEPWRGLLQGFIN---VPD----EHLHKQRLALD---------GQPRWLNLHKAAIDEPL 724
            DE   G +   +     PD    E LH++   ++         G         A+++  L
Sbjct: 704  DEDVAGDISARVARYVTPDPDFSERLHQRGAVIEARSDPMPDGGIAVTFTDITASVEAAL 763

Query: 725  A--PGNSGLVLLVEDLTE-----TQALE-DKLVHSERLASIGRLAAGVAHEIGNPITGIA 776
            A    N  L   V + TE       ALE  K    E   S  R  A  +H+I  P+    
Sbjct: 764  ALERANETLEKRVRERTEELERLNGALELAKAEADEANLSKTRFLAAASHDILQPLNAAR 823

Query: 777  CLAQNLREEREDDGEIIELSSQILDQTKRVSRIVQSLMSFAHAGGSHQNSE-EPVCLAEV 835
              A ++  ER    E   L+  I    + V  I+ +L+  +         E     +A+V
Sbjct: 824  LYATSM-VERAKGSEEERLAGNIDASLESVEEILGALLDISRLDSGVMRPEFSAFRIADV 882

Query: 836  AQDAIGLLA--LNRRNFEVQFFNLCDPDHWA-EGDPQRLAQVLINLLSNARDASPPGS-A 891
             +      A     +N E+ F     P   A   D + L ++L NL+SNA   +  G   
Sbjct: 883  LKPLETEFAPLAREKNLELTFL----PCSLAVRSDRRLLRRLLQNLVSNAVKYTQRGRIL 938

Query: 892  VRVRSEVNEHTVDLIVEDEGSGIPKNIMDRLFEPFFTTKDPGEGTGLGLALVYSIVEEHY 951
            V  R    +  V+  V D G GIP++    +F+  F   D G     GL L  SIVE   
Sbjct: 939  VGCRRVGGKLRVE--VYDTGVGIPRSKHKLVFQE-FQRLDQGAKAARGLGLGLSIVERI- 994

Query: 952  GQITIDSPADIERQRGTRIRVTLPRHVVATSPEIRD 987
                ++ P  +    G     T+   V  + PE R+
Sbjct: 995  -ARVLEHPVALRSTHGKGSAFTVELPVAVSMPEERE 1029