Pairwise Alignments

Query, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  282 bits (722), Expect = 8e-80
 Identities = 266/1067 (24%), Positives = 463/1067 (43%), Gaps = 147/1067 (13%)

Query: 3    MSFSLTQMILISAGYLMVLFGVAWISERGLIPRSIIRHPLTYTLSLGVYASAWAFYGSVG 62
            MS S   + +++  Y+ ++F +A+  +R   P         Y+LSL VY ++W F+G+VG
Sbjct: 1    MSLSSGLIAVVALAYMAIMFAIAFYGDRRSTPLPPKLRAWVYSLSLAVYCTSWTFFGAVG 60

Query: 63   LAYQYGYGFLACYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLLAFRF-RSTWAGALT 121
             A +  + FL  YLG     + AP +L  ++ I++   ++S+AD +A R+ +S     + 
Sbjct: 61   QAAEQLWAFLPIYLGPVLLLIFAPWVLQKMVLISKQQNITSIADFIAARYGKSQTLAVVV 120

Query: 122  TIIMLIGVLPLLALQIQAVADSISILTGEPVKAR------VAFAFCTLIILFTIFFGSRH 175
             +I L+GVLP +ALQ++ +   +++L G    A        A     ++ LF I FG+R 
Sbjct: 121  ALICLVGVLPYIALQLKGIVLGVNLLIGANADATGTRVQDTALVISLVLALFAIVFGTRS 180

Query: 176  IATREKHEGLVFAIAFESVIKLLALGGIGLYALYGVFGGPHELEVWLLQNQTALAALHTP 235
            +   E H G+V AIAFES+IKLLA   +G++ ++ +F G  +L     Q + ++      
Sbjct: 181  LDVTEHHRGMVLAIAFESLIKLLAFLAVGIFIVFNLFDGFDDL---FSQARQSIHLQDYW 237

Query: 236  LQEGPWRTLLL---VFFASAIVMPHMYHMAFTENLNPRSLVSASWGLPLFLLLMSL-AVP 291
             +   W ++++   V   + I +P  +H+   EN+ P+ L  A W  P++L L +L  VP
Sbjct: 238  KETINWPSMVVQTAVAMMAIICLPRQFHVTVVENIEPQDLRLARWVFPMYLALAALFVVP 297

Query: 292  LVLWAGLRLGASTNPEYFTLGLGIAANNQALALLAYIGGLSAASGLIIVTTLALSGMALN 351
            + L   + L  +   + F + L +A  + +LALLA+IGG SAA+G++IV  +ALS M  N
Sbjct: 298  IALAGQMLLPGTVISDSFVISLPLAEAHPSLALLAFIGGASAATGMVIVEAVALSTMVSN 357

Query: 352  HLVLPLY------QPPAEGNIYRWLKWTRRALIVAIITAGFMFYLSQNYHQSLANLGIVA 405
             ++LP        + P E     W+   RR  IV I+   ++ Y       SLA +G +A
Sbjct: 358  DMLLPWLLRRNNAERPFEA-FRHWMLSVRRVTIVVILLLAYVSYRLLGSTASLATIGQIA 416

Query: 406  FVATLQFLPGVLSVLYWPTANRRGFIAGLLAGTLVWMVTMLLPLLGNLQGFYIPLLDMIY 465
            F A  Q  P +L  LYW  ANRRG  AGL AG  +W  T++LP+  +  G+ + L   + 
Sbjct: 417  FAAVTQLTPAMLGALYWKQANRRGVFAGLAAGIFLWFYTLVLPIAAHSLGWSLQLFPGLA 476

Query: 466  VLDDTSWHM-------AAIASLAANVLLFTLISLFTNAS-TEEVSAAEACAVDNVRRPQR 517
             L     ++         + SLA N  LF  +S+ +    +E   A          RP  
Sbjct: 477  WLHGNPLNLPISPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQQTSARPSS 536

Query: 518  RELHAASPQEFATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLR-------DR 570
            + L A    +  T  ++ +G        E+  R  ++ F  R+       +       + 
Sbjct: 537  KPLLAVQIDDLLTLASRFVG--------EERARQSFIRFAYRQGKGFNPNQNADGDWIEH 588

Query: 571  IEANLSGLMGPSVAQDMVETFLPYKSGNENYVTEDIHFIESRLEDYHSRLTGLAAELDAL 630
             E  L+G++G S  + +V+  +  +              + +LED    +  +A E   +
Sbjct: 589  TERLLAGVLGTSSTRAVVKAAIEGR--------------DMQLED----VVRIADEASEV 630

Query: 631  RRYHRQTLQ----ELPMGVCSLAKDQEILMWNKAMEELTGIAAKHVVGSRLVTIDEPWRG 686
             +++R  LQ     +  G+  + ++  ++ WN+   EL            L+++  P   
Sbjct: 631  LQFNRALLQGAIENINQGISVVDQNLHLVAWNRRYLELFNYP------DGLISVGRPIAD 684

Query: 687  LL-----QGFINVPDEHLHKQRLALDGQPRWLNLHKAAIDEPLAP--------GN----S 729
            ++     +G     +  +H  R     +  W+   +A   E L P        GN     
Sbjct: 685  IIRYNAERGLCGPGEAQVHVAR-----RLHWMRQGRAHSSERLFPNGRVIELIGNPMPGG 739

Query: 730  GLVLLVEDLTE-----------------------------TQALEDKLVHSERLA-SIGR 759
            G V+   D+T                               QAL +    +E ++ S  R
Sbjct: 740  GFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQLNQALSEAKSQAEAVSNSKTR 799

Query: 760  LAAGVAHEIGNPITGIACLAQNLREEREDDGEIIELSSQILDQTKR-VSRIVQSLMSFAH 818
              A V+H++  P+      +  L ++ E   E      Q +D + R    ++  L+  + 
Sbjct: 800  FLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHMDSSLRSAEELISDLLDISR 859

Query: 819  -AGGSHQNSEEPVCLAEVAQDAIGL---LALNRRNFEVQFFNLCDPDHWAEGDPQRLAQV 874
               G      +P  L E+  D +G    L    +  E   F L       + D + L +V
Sbjct: 860  LENGKITPDAKPFALNELF-DTLGAEFKLLAAEKGLE---FRLRGSRLRVDSDMKLLRRV 915

Query: 875  LINLLSNARDASPPGSAVRVRSEVNEHTVDLIVEDEGSGIPKNIMDRLFEPFFTTKD--- 931
            L N L+NA       S + + +      + L V D G GI  + +  +F+ F        
Sbjct: 916  LQNFLTNALRYGK--SPILLGARRQGERLWLEVWDRGPGIADDKLQVIFQEFKRLDSHQT 973

Query: 932  -PGEGTGLGLALVYSIVEEHYGQITIDSPADIER--QRGTRIRVTLP 975
               +G GLGLA+   +         +  P ++     +GT  RV++P
Sbjct: 974  RAEKGLGLGLAIADGLCR------VLGHPLEVRSWPGKGTVFRVSVP 1014