Pairwise Alignments

Query, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

Subject, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

 Score =  155 bits (392), Expect = 8e-42
 Identities = 116/385 (30%), Positives = 177/385 (45%), Gaps = 56/385 (14%)

Query: 427 EAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTLT 486
           ++A+V  +P  G ++AL+G      + +NRA+ A R  GS  KP +Y  AL+  S YT +
Sbjct: 423 QSALVTLDPNNGAIRALVGGFSFEQSNYNRAVQAKRQPGSSFKPFIYSAALD--SGYTAS 480

Query: 487 SWVQDEPF-SVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIK 545
           S V D P   V  +  +VWRP+N      G I + + L  S NL + +L   +GV   I 
Sbjct: 481 SLVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTID 540

Query: 546 TIGRLGVN-VDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPL 604
            I + G N  D P   ++ LG   ++PM++AT + T ANGG+      I  + +  GE L
Sbjct: 541 YIAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIESRSGETL 600

Query: 605 --------------------------------------------KRYPFQIQQTFDPGAI 620
                                                        + P   +Q  D    
Sbjct: 601 FTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAEQIIDGRTT 660

Query: 621 YLVQNAMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRD 680
           Y++ + +Q V++ GTGR     L R+  LAGKTGT+N+S+D+WFSG++ D +  VW+G D
Sbjct: 661 YILTSMLQDVIKRGTGRRAL-ALGRT-DLAGKTGTTNESKDAWFSGYNADYVTTVWVGFD 718

Query: 681 DN---GKTPFTGATGALQVWTSFMKKA-DPLPLDMP-QPDNVVQAWIDPYSGHGSDASCP 735
                G+  + G T AL +W +FM  A    P   P +P+ ++   +DP SG  +  S P
Sbjct: 719 QPETLGRREY-GGTAALPIWMNFMGAALKDKPAHAPAEPEGILSLRVDPVSGRAASPSTP 777

Query: 736 GAVQMPYIRGSEPPAGAACGGEQDP 760
            A    +     PP+    G    P
Sbjct: 778 NAYFELFKAEDSPPSVDELGNGAAP 802



 Score =  145 bits (365), Expect = 1e-38
 Identities = 80/258 (31%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 171 IKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQLVKN 230
           I+  ++P   ++ L++ ED  F +H+GV P S++RA      +G ++ GGST+T Q+ KN
Sbjct: 70  IRFAEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVAKN 129

Query: 231 FYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290
           F+L+SERS SRK  E ++A+ +E    K EILE Y+N++++G       +G   A+Q ++
Sbjct: 130 FFLTSERSFSRKTNEILLALQIERELTKDEILELYVNKIYLG----NRAYGIDAAAQVYY 185

Query: 291 SQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVDAAK 350
            + + ++ L Q+A++ G+ K PS +NP  +P RA  RR+ +L  + + G   QA  +AA 
Sbjct: 186 GKSIRDVSLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAAL 245

Query: 351 KMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSM 410
             PL  +      + + P   ++ + ++   Y  +  T EG R+ T+    +Q  A  ++
Sbjct: 246 AEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSDAYT-EGFRVTTTVPSDMQEMANKAV 304

Query: 411 SETFKRLAGRKGADDVEA 428
            +       R G    EA
Sbjct: 305 LKGLSDYDERHGYRGPEA 322