Pairwise Alignments

Query, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

Subject, 852 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Dickeya dianthicola ME23

 Score =  171 bits (434), Expect = 1e-46
 Identities = 90/243 (37%), Positives = 146/243 (60%), Gaps = 5/243 (2%)

Query: 168 RILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQL 227
           RI +K+DQ+P  L+   +ATED  F+ H GV P+ I+RA  +  +SG   QG ST+TQQL
Sbjct: 66  RIPLKLDQIPPTLVNAFIATEDSRFFEHHGVDPQGIIRAAMIALTSGHASQGASTITQQL 125

Query: 228 VKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQ 287
            +NF+LS ER+L RK+ E  +A+ +E    K EILE YLN++++G       +G G A+Q
Sbjct: 126 ARNFFLSPERTLLRKIKEVFLAIRIEQTLTKEEILELYLNKIYLGY----RAYGVGAAAQ 181

Query: 288 FFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVD 347
            +F +P+ +L L Q+A++ G+ K PS +NP    +RA+ARRN+VL  + ++   +QA+ D
Sbjct: 182 VYFGRPVEQLTLAQMAMIAGLPKAPSTFNPLYSYDRAVARRNVVLSRMLDENYITQAQYD 241

Query: 348 AAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAE 407
            A+   L           S     ++V++++ + Y  ED   +G +++T+    LQ  AE
Sbjct: 242 QARNEKLVADYHAPEIAFSASYLAEMVRQEMVKRY-GEDAYNDGYQVYTTITRKLQQAAE 300

Query: 408 TSM 410
            ++
Sbjct: 301 DAV 303



 Score =  110 bits (275), Expect = 3e-28
 Identities = 111/411 (27%), Positives = 171/411 (41%), Gaps = 93/411 (22%)

Query: 425 DVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYT 484
           DV +A+V  NP+ G V AL+G      + FNRA  A+R +GS +KP +Y  A+++    T
Sbjct: 424 DVNSALVSLNPKDGAVLALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDK--GLT 481

Query: 485 LTSWVQDEPFS--VKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPN 542
           L + + D P +    GA G  W P+N      G I L QGL  S N+   +    +GV  
Sbjct: 482 LATILNDAPITRWDPGA-GSDWSPKNSPPEYDGQIRLRQGLGQSKNVVMVRAMRAMGVDY 540

Query: 543 VIKTIGRLGV-NVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGF--------------- 586
               + R G    +     ++ LG+   +P+QV   Y  + NGG+               
Sbjct: 541 AADYLERFGFPEQNIVHTESLALGSASFTPLQVVRGYAVMTNGGYLVDPYFITKIDNASG 600

Query: 587 ---------------NTPM-------------RGIRSVLTAEGEPLKRYP---------F 609
                          N P+               + +V T++  P++  P          
Sbjct: 601 NTVFTAIPKIVCDTCNLPVIYGDTQRSAVLSDDSMENVATSQENPVQSAPQADPATPSEV 660

Query: 610 QIQQTFDPGAIYLVQNAMQRVMRE-------------GTGRSVYNTLPRSLTLAGKTGTS 656
             Q    P A +++   +  ++++             GTG      L R   + GKTGT+
Sbjct: 661 ARQAATQPYAPHVISTPLSFLIKDALNSNVFGEPGWMGTGWRAGKVLQRR-DIGGKTGTT 719

Query: 657 NDSRDSWFSGFSQDLLAVVWMGRDDN----GKTPFT------------GATGALQVWTSF 700
           N+S+D+WFSG+  +++A VW+G DD+    G+T  +            GA  A   W  F
Sbjct: 720 NNSKDAWFSGYGPNIVASVWIGFDDHRRDLGRTSTSGVIRDQISGYEGGAKSAEPAWDDF 779

Query: 701 MKKA---DPLPLDMPQPDNVVQAWIDPYSGHGSDASCPGAVQMPYIRGSEP 748
           MK A    P     P P  VV   ID  SG  SD     + Q  +I G++P
Sbjct: 780 MKVALAGVPEQKTSP-PQGVVTVTIDRSSGKLSDGGA-NSRQEFFIDGTQP 828