Pairwise Alignments

Query, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

Subject, 764 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  253 bits (647), Expect = 2e-71
 Identities = 170/546 (31%), Positives = 274/546 (50%), Gaps = 30/546 (5%)

Query: 171 IKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQLVKN 230
           + ++ +  Y+ + ++A EDR FYSHFGV P  + RA+  N  +G   QGGSTLTQQL KN
Sbjct: 136 LALEDMSPYIPQAVMAIEDRRFYSHFGVDPLGLGRAIVTNVLTGRAVQGGSTLTQQLAKN 195

Query: 231 FYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290
            +LS +R+L RK+ E +++  LE  + K +IL  YLN V+ G +     +G   AS+ +F
Sbjct: 196 LFLSPDRTLERKVQEVLLSFWLEHEFTKDQILAMYLNRVYFGSN----AYGVEAASRRYF 251

Query: 291 SQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVDAAK 350
           ++   ++ L + A+L G++K PS  +P R P+ A  R  +VL  + + G  +  E+  A 
Sbjct: 252 NKSARDVNLGEAAMLAGLLKAPSRLSPARDPQAAEERAQVVLQSMRDVGFITDDEIKTAM 311

Query: 351 KMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSM 410
             P    KR       + A  D+V  ++R    +    ++ + + T+ DP L+  AE ++
Sbjct: 312 SQPPTKAKRFWSGAEHYAA--DMVLEEVRGLVGE---VKQDIVVDTTIDPNLERDAEKAL 366

Query: 411 SETFKRLAGRKGADDVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKP 470
           +   +    ++GA     A +V+   TG ++A++G      + FNRA+ A R  GS  KP
Sbjct: 367 THVLQGDGKKQGASQ---AALVSIDGTGAIRAVVGGADYAQSQFNRAVKAKRQPGSAFKP 423

Query: 471 SVYLTALEQP-SKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNL 529
            VY+ ALE   + YT+ +   D P  +       W P+NY+++  G + L   LANS N 
Sbjct: 424 FVYVAALESGLTPYTIRN---DGPVRIGN-----WTPENYEKKYRGEVTLATALANSLNT 475

Query: 530 STAKLGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTP 589
             A+L +EVG   V +   R+G+  +     ++ LG   +S M++   Y    NGG+   
Sbjct: 476 IAAQLVMEVGPERVTQVAHRMGIESELQNNASIALGTSEVSLMELTASYAPFMNGGYKAT 535

Query: 590 MRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQNAM-QRVMREGTGRSVYNTLPRSLT 648
              ++ +  A+G+ L    +          I    N M  RV+ EGTG++      +   
Sbjct: 536 PHIVKRITDADGKVLYENKYDNPPRVLSEEIAATMNGMLSRVITEGTGKA---ARLQGWQ 592

Query: 649 LAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDD-NGKTPFTGATGALQVWTSFMKKA--- 704
            AGK+GT+   RD+ F G++ +L   VW G DD       TG     + W  FM  A   
Sbjct: 593 AAGKSGTTQSFRDALFVGYTSNLTTGVWFGNDDGTSMKKVTGGGLPARAWKDFMTAAHSG 652

Query: 705 -DPLPL 709
             P PL
Sbjct: 653 LSPSPL 658



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 3   RTRNPRTPQKRPTGRSRAWLGWALKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPAK 61
           + +  R   +  TG  R+   W + L + G + VAG  +Y  A +    S   W+IP +
Sbjct: 56  KEKRSRNSGRGVTGFIRSLFYWCIVLGIWGGIGVAGLVLYYGARMP---SASSWSIPER 111