Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease from Pseudomonas putida KT2440

Subject, 615 a.a., exodeoxyribonuclease V subunit alpha from Erwinia tracheiphila SCR3

 Score =  421 bits (1082), Expect = e-122
 Identities = 289/665 (43%), Positives = 368/665 (55%), Gaps = 70/665 (10%)

Query: 30  LLQLLDRWVERGWLRALDRAFVSFLEERAPGSDPLLLLAAALASHQLGHGHVCLDLQQTL 89
           +++LL+   ER  LRALD  F   +   A    P L+LAAA  S   G GHVCL L    
Sbjct: 4   MVELLNIACERRVLRALDVQFARLI---AGDERPALMLAAAWVSAGAGEGHVCLPLVHFT 60

Query: 90  AEPDFALSLPPEGDALIGPLLLPSQLLANLDLNAWLQRISASPLVAAGDTPGQQARPLVR 149
            +  FA   P           L  Q+        W   +     V  G  P     PLV 
Sbjct: 61  EQQLFAGRYPE----------LARQIWFEAGEPDWQTLLPQEEAVGDGSGP----TPLVL 106

Query: 150 SGERLYLRRYWSYERRIDQALRQRLSQAEAPPADL--PERLAQLFEGGAPAGQVDWQKLA 207
             +RLYL R W  E  +          A   P  L  PERL  + +        + QK+A
Sbjct: 107 WQQRLYLHRMWQSEGEVAHFF------AHDTPVSLQNPERLRAILDDYFGVQSDNGQKIA 160

Query: 208 CALATRAGFSIITGGPGTGKTTTVVRLLALLQAPAVEQGRPLRIRLAAPTGKAAARLTES 267
            A+A     ++I+GGPGTGKTTTV  LLA L   +   G  LRI LAAPTGKAAARLTES
Sbjct: 161 AAVAITRQIAVISGGPGTGKTTTVANLLASLLELS---GEKLRICLAAPTGKAAARLTES 217

Query: 268 IGQQVERLQVSAEVRGQIPTEVSTVHRLLGSRPGSRHFRHHAGNPLPLDVLVVDEASMID 327
           + + ++ L VS   R Q+ TE +T+HRLLG  PGS+  R+HAGNPL LD+LVVDEASM+D
Sbjct: 218 LAKALKALTVSEATRQQLLTEATTLHRLLGVLPGSQRMRYHAGNPLHLDLLVVDEASMVD 277

Query: 328 LEMMANLLDALPPRARLVLLGDKDQLASVEAGAVLGDLCRDAEEGFYSPATAAWLQQVSG 387
           L MMANL+ ALP RAR++ LGD+DQLASVEAGAVLGD+CR AE G YSPA A  L+ ++G
Sbjct: 278 LPMMANLIAALPSRARVIFLGDRDQLASVEAGAVLGDICRCAEVG-YSPARAQELRLLTG 336

Query: 388 ESLAGSGLKAGDEQRHPLAQQVVMLRFSRRFGEGSGIGQLARLVNRQDAHAARNLLAAPP 447
             +A     A D Q+  +   + +LR S RFG  SGIGQ+A+ VN  D+H    L AA  
Sbjct: 337 CDVA-----ANDVQQAGVHDSICLLRKSFRFGASSGIGQMAQAVNSGDSHQVDRLFAAGF 391

Query: 448 ADVHSLSLKHEQDRAFDRLLLDGLNRGTDGPQGYRSYLRTL-GRYRPALDTAFDDPAWEQ 506
            D+   SL  +    +  LL   L        GY+ YL  L  + +P             
Sbjct: 392 TDIERFSL--QTGEQYQYLLGVCL-------AGYQEYLSLLRNKVQPE------------ 430

Query: 507 WAGKVLRSFEDFQLLCAVRRGAWGVEGLNERVARVLHNAGLIDSQQ----PWYEGRPVLV 562
              + + +F  F+LLCA+R G +GV GLNER+   L    LI         WY GRPV++
Sbjct: 431 ---QAIEAFGRFRLLCALREGPFGVSGLNERIEAFLSRQRLIQRAPGIGGKWYAGRPVMI 487

Query: 563 TRNDYGLGLMNGDIGIALRLPDEHGQPLLRVAFPRNDGSGGVRFVLPSRLNEVETVFAMT 622
           +RND  LGL NGDIGI +   +E     L+V FP  DG+  ++ V P RL   ET FAMT
Sbjct: 488 SRNDSALGLFNGDIGITMYNDEEK----LKVFFPLADGT--IKAVQPVRLPPHETAFAMT 541

Query: 623 VHKSQGSEFSHTALVLPEALNPVLTKELVYTGITRAKHCFSLVEPRQGIFEEAVARKVRR 682
           VHKSQGSEF HT LVLP+   P+LT+EL+YT ITRA+   +L    Q +F +AV  +  R
Sbjct: 542 VHKSQGSEFDHTLLVLPDQFTPILTRELIYTAITRARSKLTLF-AEQTVFNQAVKIRTLR 600

Query: 683 ISGLM 687
            SGL+
Sbjct: 601 RSGLI 605