Pairwise Alignments

Query, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 320 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  211 bits (536), Expect = 2e-59
 Identities = 121/288 (42%), Positives = 173/288 (60%), Gaps = 3/288 (1%)

Query: 4   RSEELQVFVAVIDCGSISAAAEQMGQTPSAVSRTLSRLEGKLGTTLVNRTTRRMDLTEEG 63
           RS E++ FV V++ G  SAAA  +G TPSAVS+ +SR+E +LG  LV+R+TR++ LT EG
Sbjct: 8   RSGEMEAFVQVVESGGFSAAARLLGMTPSAVSKLISRMELRLGIQLVHRSTRKLQLTPEG 67

Query: 64  RYFLERARLILQQMDEMEERLSMNRQTPTGRLRINAAAPFMLHAILPWIGEFRRQYPGIE 123
             F ER+  +L  MDE E R +     P GR+ INA+  F  H ++P +      +P I 
Sbjct: 68  TEFYERSLRVLADMDEAE-RCAAAGAAPRGRVSINASVSFGQHKLVPLVPRLLEMHPQIT 126

Query: 124 LELNTDDLIIDLLEQSTDVAIRIGELADSSLHARSLGCSPVQVLASPAYLEQHGTPRQVE 183
           L++   D I+DL+++  D+AIR G+L  S L AR LG +   ++A+P+YL ++GTPR  +
Sbjct: 127 LDIALTDRIVDLMDERADIAIRWGQLPSSDLVARRLGETSQSIVAAPSYLAKYGTPRTPQ 186

Query: 184 DLANHCLLGFSQPESLNHWPLRHAQGDRW-SIRPTLVASSGETLRQLALAGEGIVSLSHF 242
           +L  H  LG+S   +   WPLR     +W  +   + A  GETLRQLA+AG G+  LS +
Sbjct: 187 ELEAHNRLGWSYRRNSPDWPLRVDGRTQWLPVAGPVRAGDGETLRQLAIAGAGVARLSLY 246

Query: 243 MTHEDIRTGRLQVLLSEANNGYRQPIHAVYY-RNTQLALRIQCFLDFI 289
               DI  GRL  LL E N    +PIHAVY  +   L  R++  LDF+
Sbjct: 247 HIQHDIDAGRLVPLLQEFNPCEVEPIHAVYIGKAGTLPARVRAVLDFL 294