Pairwise Alignments

Query, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  289 bits (740), Expect = 2e-82
 Identities = 184/482 (38%), Positives = 275/482 (57%), Gaps = 18/482 (3%)

Query: 171 LISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDAR--LQQ 228
           +++  R + L++       I +NS A       +L   L   D+ K  L  ++ R  L Q
Sbjct: 61  IVASIRLEALRLATTDESRIRDNSKALITRQHTELQTLL---DHHKTLLSGDEEREMLTQ 117

Query: 229 FENAVLAYRDAVRQF---------RDAVANITTSRAEMTV----QGADIVKRSDALYQIQ 275
            E    AY   V Q          +DA+  + +  A   V       D++  + +  Q  
Sbjct: 118 LEGNANAYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTA 177

Query: 276 LERRDIESTQARSLQAIATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHM 335
           ++      + A+ +     +LAL   +L A L+TR IT PL   L+    IASGDL+Q +
Sbjct: 178 VDSAAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPI 237

Query: 336 RVTRRDELGVLQQGIARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVE 395
            V+ +DE   L   +A M   L+  + GI +   Q+  AAEE+S+V EQ++    +Q  E
Sbjct: 238 AVSGKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDE 297

Query: 396 TDQVATAMHEMAATVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRS 455
            +Q ATA+ EM+A V EVA NA  ++ A+  +D++++ G   + E I  I+ L +++  +
Sbjct: 298 IEQAATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGA 357

Query: 456 TEAMNLLQQESQKIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLA 515
           +     L  ++Q I  V++VI+ +A QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA
Sbjct: 358 SNKAEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLA 417

Query: 516 QRTQKSTEEIEELIASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQ 575
           QRTQ STEEIE++I  +Q GTQ    A+  S      +++ A  AGS+LE IT+ +S I 
Sbjct: 418 QRTQDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQIS 477

Query: 576 SMNQQIAAAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVS 635
             N  IA+AAEQQ+ VA ++ RS++N+RD+S QTAA + +T+A+S EL+RL   L  LV+
Sbjct: 478 QRNLVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVA 537

Query: 636 QF 637
           +F
Sbjct: 538 RF 539