Pairwise Alignments

Query, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  601 bits (1549), Expect = e-176
 Identities = 359/646 (55%), Positives = 442/646 (68%), Gaps = 15/646 (2%)

Query: 1   MNSWFA----NISVNLKLGLGFGLVLVLTGLLALTGWTSLGSLIDRSNWMGDIGQLNKDL 56
           M+ W A    NISV  KLG+GFGLVL+LT L+  TGWT LG +  R + +G I  LN   
Sbjct: 1   MHRWLAEKLGNISVKTKLGVGFGLVLLLTLLIMFTGWTGLGDVTSRGDKLGHISSLNGLT 60

Query: 57  TDLRIARLQYMIANGDD--TAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTIS 114
            DLR+ARL + +  G+    A  N +AKLD+  +  A L    + P++  L+ +  D +S
Sbjct: 61  KDLRLARLDFEMRRGEQGTDAVNNLIAKLDSGLQTAADL---IEQPDDKALVEQQQDALS 117

Query: 115 AYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISK 174
            YK +   M Q       AR  +  +A   D A+  +S+   +  + DSV   Q+  +  
Sbjct: 118 QYKKAFATMVQAGLKREGARSKLGDTA---DNAVAKVSEVEKSLLQGDSV--TQFNSVVD 172

Query: 175 ARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSE-DARLQQFENAV 233
             + + Q R  VRGY        EQ AL  +D A+     L+ QLP++  A L++   ++
Sbjct: 173 LSKLIQQARFQVRGYTYSAKVEAEQPALDAIDNAVKKITELQGQLPAQYQANLEEASTSL 232

Query: 234 LAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAIA 293
            AYR AV Q+RD+      +   M+ QG  ++  SD L   Q   RD ++  A+ L  +A
Sbjct: 233 QAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLLLLA 292

Query: 294 TLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIARM 353
           T+LAL+ G++AA  ITRQI  PL  TL   +++ASGDL+ ++   R+DELG LQ+ +  M
Sbjct: 293 TVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSM 352

Query: 354 GTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEV 413
              LRELI GI DGVTQIASAAE+LSAVTEQTSAG NSQKVETDQVATAM+EMAATVQEV
Sbjct: 353 TVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEV 412

Query: 414 ARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVM 473
           ARNAE+AS AA  AD +AR GD+VVGEAI QIERLA ++  ST AM  L++ES KIGSV+
Sbjct: 413 ARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVL 472

Query: 474 DVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQ 533
           DVIKSVA+QTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRTQKSTEEIEELI  LQ
Sbjct: 473 DVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQ 532

Query: 534 HGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAE 593
            GTQQVA  M  SR LTDSSVEL R+AGS+L SIT TVS+IQ+MN QIA AAEQQSAVAE
Sbjct: 533 SGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAE 592

Query: 594 EISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639
           EI+RS+LNVRDVSEQTAAAS+ETAASS ELARLG  LQ LV +FRV
Sbjct: 593 EINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638