Pairwise Alignments

Query, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

Subject, 655 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  392 bits (1006), Expect = e-113
 Identities = 255/652 (39%), Positives = 387/652 (59%), Gaps = 22/652 (3%)

Query: 5   FANISVNLKLGLGFGLVLVLTGLLALTGWTSLGSLIDRSNWMGDIGQLNKDLTDLRIARL 64
           FAN+ +  KLGLGF LVL+LT L+A  G  SL ++  R   +  +  LN  L  +R+   
Sbjct: 9   FANLGMAKKLGLGFTLVLLLTALIAAIGVWSLQTIGQRFEGLKAMSSLNSGLLKVRLIEQ 68

Query: 65  QYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNK-- 122
            Y + + D  A       +DA +   A L    +S  NV ++ ++ + ++AY+ + ++  
Sbjct: 69  DYAL-HADPKAVDALHESVDALAALAASLKA--QSAANVPVMTDVEEALAAYRKAFDEFV 125

Query: 123 -MRQGYD-ATRAARVSMDSSAIRADQAMDALS-------QEVMARPEADSVRLA-QYQLI 172
            + Q  D A   A  S+ S A   D     L+       +E   +  A+ +  A Q   +
Sbjct: 126 ELTQTKDLALEMASWSVSSVANNLDVLQAGLADDGAYGLKESQGKEGAEFIEQAGQVSQV 185

Query: 173 SKARQQLLQ---VRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDAR--LQ 227
           S+   Q +    VR++    + E++S  EQ  + Q D ALA  + LK  +     +  L 
Sbjct: 186 SRLMLQAMNEAHVRLNQSRKVDEDTS--EQGKIEQADQALAQVEQLKTSVKDSGYQTVLN 243

Query: 228 QFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQAR 287
           +    + A+ + + ++   +A       ++  +   +V R +  Y  + +    +  ++ 
Sbjct: 244 EVAGHIAAFSEKLGEYTGLLAQEKVVYKQLHDRADQVVSRVNQAYGAEDQSMQAQLKKSS 303

Query: 288 SLQAIATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQ 347
            L   ++ LALLVG++AA +ITR I  PL+  +   ++IA+GDL+  M V RRDE+G L 
Sbjct: 304 MLILGSSALALLVGLIAAWVITRLIVAPLRSVIAVAQQIAAGDLSGRMEVNRRDEIGQLM 363

Query: 348 QGIARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMA 407
           Q + +MG  L +++SG++ G+ Q+AS+A  LS+VTEQT+   +SQK ET+QVATAM++M 
Sbjct: 364 QAMQQMGNGLSQMVSGLQAGIEQLASSAHSLSSVTEQTNVEVSSQKEETEQVATAMNQMT 423

Query: 408 ATVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQ 467
           ATV +VARNAE+A+ AA  AD++  +G RVV +++ +IE LA     ++ ++  L  E Q
Sbjct: 424 ATVHDVARNAEEAAQAAQTADEKVDSGQRVVRQSLQRIELLATSSSSASASIESLSAEIQ 483

Query: 468 KIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEE 527
            IGSV+ VIKSVAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ STEEIE 
Sbjct: 484 HIGSVLSVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTQHSTEEIER 543

Query: 528 LIASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQ 587
           L+++L+   Q     +Q S  L   +V  A +  S+L SI   VS IQ MNQQIAAAAE+
Sbjct: 544 LVSTLRSAAQSSVQQIQQSGELVKLAVSDALETESALGSIAVAVSLIQQMNQQIAAAAEE 603

Query: 588 QSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639
           QS+VAEEI+RS+ ++R  ++Q+A +    AASS++LA+LG +L+ +V  FR+
Sbjct: 604 QSSVAEEINRSVTSIRASADQSALSMQGNAASSIQLAQLGAELKGMVGHFRL 655