Pairwise Alignments

Query, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  296 bits (758), Expect = 2e-84
 Identities = 198/519 (38%), Positives = 293/519 (56%), Gaps = 36/519 (6%)

Query: 150 ALSQEVMARPEADSVR---LAQYQLISKARQQLLQVR-IDVRGYIAENSSA---NEQAAL 202
           AL Q    R ++D V    L     +    Q LL++R + +R  +  +  A   NEQ  L
Sbjct: 30  ALLQMANMRQQSDQVENNWLPSVMAVGDMSQDLLRIRALTLRLLVNRDPQALAQNEQK-L 88

Query: 203 RQLDAALADTDNLKRQL---PSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAE--- 256
            ++ A L     L + L   P+E     +F+     Y +   Q       +T S+A    
Sbjct: 89  TEIKANLHRARTLYQGLIVLPAEQVLFDRFKAEEARYLERQEQV------VTLSKANQLE 142

Query: 257 --MTVQGADIVKRSDALYQIQLERRDIESTQARSLQAIAT--------------LLALLV 300
             + V   ++ + +D +     E   +  T A    ++A               +L  LV
Sbjct: 143 DAIRVVNGEMNQLADEMAATLRELVTLNKTSANQAASLAQSVFSQSRIWVIGMIVLTALV 202

Query: 301 GVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIARMGTTLREL 360
            +  AVL+TR I  PL  +L   + +ASGDLT  + V  RDE   LQQ +  M   LR+ 
Sbjct: 203 TIGLAVLLTRSIVLPLAQSLKVAQGVASGDLTGEISVCGRDEPARLQQALKSMQENLRDT 262

Query: 361 ISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEVARNAEQA 420
           I  I +   Q+ASA+EELS VTE  + G + Q  E +Q ATA+++M A V+EVA NA   
Sbjct: 263 IRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAVEEVASNAVAT 322

Query: 421 SHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVMDVIKSVA 480
           S A+  +D  A+ G   V + +  IE LA D+  +   +  L Q+   I  V+DVI+S+A
Sbjct: 323 SQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIA 382

Query: 481 EQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQHGTQQVA 540
           EQTNLLALNAAIEAARAG+AGRGFAVVADEVR LA RTQ+ST+EIE++I+ +Q GT Q  
Sbjct: 383 EQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAV 442

Query: 541 NAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAEEISRSIL 600
           ++MQ S     S++++A+ AG++LE I S  + I   N  IA+A+EQQ+AVA E+ R+++
Sbjct: 443 SSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQAAVAREVDRNLM 502

Query: 601 NVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639
           N+RD++ QT+  +++T+A+S +L+RL   L TLV++F V
Sbjct: 503 NIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541