Pairwise Alignments

Query, 361 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas putida KT2440

Subject, 450 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  103 bits (258), Expect = 7e-27
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 36/362 (9%)

Query: 10  YATQLDAKVARLRELLAPFGAPEPAVFDSPREH----YRLRAEFRL-WREDGQRHYAMFA 64
           +  QL  K   L E L+     EP  + +P       YR RA   + W    ++    F 
Sbjct: 107 HGEQLALKQRMLAEQLSRVAGVEPQEWAAPLSGAEFGYRRRARVAVRWDARAKQLEVGFR 166

Query: 65  PGEKHKAILIDDFPIASERINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMITMCY 124
                  + ID+ P+  + +  +M RL    +   +    L  VE  +   G ++  +  
Sbjct: 167 AVASQDIVAIDECPVLVQALQPIMQRLPNMLRRLSK-PQALGHVELFS---GTSVAVLLR 222

Query: 125 H-RPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAVE-KLDVAGRVFSYRQPEGA 182
           H  PL EA     ++        +    +G+   +  D  +  +L       +YR   G 
Sbjct: 223 HIAPLSEADLQVLKEFCAFHEAQLWLHGEGQPEPVEADSVLGFRLSHWDLELAYRP--GD 280

Query: 183 FTQPNGAVNQKMLSWAFEAIGEREDD-LLELYCGNGNFTLPLATRVRQVLATEISKTSVN 241
           F Q N  VN+ M++ A E +  + D+ +L+L+CG GNF LPLA +VR+V+A E  +T V 
Sbjct: 281 FVQVNAGVNEAMVAQALEWLAPQPDERVLDLFCGLGNFALPLARQVREVVAVEGVQTMVE 340

Query: 242 AALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGMD 301
            A  N   N + NV+  +    +L+Q L +          +     F  V +DPPR G  
Sbjct: 341 RAAVNAVSNDLHNVQFFQ---ADLSQPLTDA---------EWAKQGFSAVLLDPPRDG-- 386

Query: 302 PDTCELTRRF-----ERILYISCNPETLAANIAQL-QDTHRIERCALFDQFPYTHHMESG 355
               E+ R+      +R++Y+SCNP TLA +  +L +  +R++R  + D FP T H+E+ 
Sbjct: 387 --ALEVVRKLATLGAKRLVYVSCNPATLARDTVELVKQGYRLKRAGILDMFPQTAHVEAM 444

Query: 356 VL 357
            L
Sbjct: 445 AL 446