Pairwise Alignments

Query, 406 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 559 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  106 bits (265), Expect = 2e-27
 Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 6/375 (1%)

Query: 18  FWLARVFTASGFQMLTVAIGWHLYQLTGNVLDLGLVGLVEFAPRVLFMLHTGHVADRYDR 77
           F   +  +  G  M   A+ W +Y +T +   LGL   V   P  LF L+ G ++D+Y R
Sbjct: 19  FITGQAISRVGTWMERTAVSWVVYDMTHSTFMLGLTAFVSQFPSFLFSLYGGILSDKYPR 78

Query: 78  RKVAALCQSLQGLIALALAVGSATDNVTRELIFALAFLLGASRSFEMPATQALLPNVV-- 135
            K+  + Q    + A  LA+     +     I +L  LLG   +F++PA Q+L+  ++  
Sbjct: 79  LKIVMITQVASFVQAAILAIIVLGGDTAIWHILSLITLLGIINAFDIPARQSLVNELLTD 138

Query: 136 PAGLFPRAVAASASATQSATIVAPAVGGF-LYAFGSMWVYGPTVALYAIACVLTLSLQAR 194
           PA L   AVA ++S    A ++ PA+ G  L +FG+   +      Y    V    L+ +
Sbjct: 139 PADL-SNAVALNSSVVNLARLIGPAIAGLVLSSFGAGICFSLNALSYLAVIVSLFFLRLK 197

Query: 195 GQVAQRGRASIESLLAGIRFIRSRPDILGAISL--DLFAVLLGGATALLPVFAKDILLTG 252
            Q  +  + S  S +           +L    L   + ++L+     LLP FAK +    
Sbjct: 198 PQPKKAKKQSNLSEIRDTLHYLKHHSVLAPTMLYIAIISLLVIPYNTLLPEFAKAVFQGN 257

Query: 253 PMGLGLLRSAPAVGALLMSLWLARFPFQRNVGRTMFTAVGVFGVATIAFGLSTSFWFSLA 312
               G + S+  +GA L +L+LA    +    R +     V G   + F ++     +L 
Sbjct: 258 AQTYGFMVSSIGLGAFLGTLFLASLAPETKKSRILIINAAVLGGCLMLFSVTKLLPLALF 317

Query: 313 VLVVLGAADMISMVIRSSFVQLETPDEMRGRVSAVNGLFIGASNQLGEFESGVTAHWFGT 372
           + V+ G   +    I  + VQ  + +E RG++ ++  + +     +G    G+ ++  G+
Sbjct: 318 LAVITGFTGLTQSTICLTIVQTASSEEKRGQLISLYAMALFGMMPVGSLLVGLVSNQIGS 377

Query: 373 VPAVVLGGVGTLVVT 387
              +++ G+  +V++
Sbjct: 378 STTILIQGLIAVVIS 392