Pairwise Alignments

Query, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

Subject, 384 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Variovorax sp. SCN45

 Score =  175 bits (444), Expect = 1e-48
 Identities = 121/364 (33%), Positives = 182/364 (50%), Gaps = 44/364 (12%)

Query: 5   LPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFV-KGEQDRDVMMNTVAPVWDGNETWLVL 63
           L  IW ++I   ++ + V DGFDLG GML PF  + + +R V++N+V PVW+GN+ WL+L
Sbjct: 12  LRFIWWLLIGVLLVGFAVTDGFDLGSGMLLPFAARNDIERRVVINSVGPVWEGNQVWLIL 71

Query: 64  GGAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADK-RHIWDKAFIWG 122
           GG  +F A+P  YAV     YL + ++L  LI R VAF+FR K ++ + R  WD    + 
Sbjct: 72  GGGAVFAAWPQLYAVSFSGFYLAMFVILTALILRPVAFKFRSKRESPQWRARWDWVLFFS 131

Query: 123 SLIATFFQGVALGAFLEGFKV---VDRH--FAGGTLDWLTPFSLFCGLGLIVAYTLLGCT 177
             +     GVA+G  L+G       D H  + GG    L PF++ CGL  +    + G  
Sbjct: 132 GFVPALICGVAMGNVLQGVPFRFNNDMHIFYDGGFFGLLNPFAILCGLVSVAMLVMHGAA 191

Query: 178 WLIMKTEGPLQQ--KMHDMARPLALVLLVVIGIVSLWTPIAYPQI--------------- 220
           WL++KT GP+ +  + + M   +  + L  +  V L T I   +I               
Sbjct: 192 WLLLKTAGPVAERARTYGMVAAVLTIALYALAGVLLATSIGGYRISSVIDAVGPSNPMLK 251

Query: 221 -----ADRW-FSMPNLIWFMPVPLLVLVTFYGLLKAVARNAHYTPFLLTLVLIFLGYSGL 274
                A  W  +     W M  P      F G L A+   A   P +L+L+   LG +G+
Sbjct: 252 TVELHAGAWTANYAAHPWTMAAP---AAGFVGALGALLGLALRRP-VLSLLTAALGIAGI 307

Query: 275 ----GISLWPNIIPPSI------SIWDAAAPPQSQGFMLVGTLFILPFILMYTFWSYYVF 324
               G S++P I+P SI      ++WD+++   +   MLV T F +P I+ YT W Y+V 
Sbjct: 308 ILSVGASMFPFILPSSIDPRASLTVWDSSSSHLTLFIMLVVTAFFIPIIVAYTSWVYHVL 367

Query: 325 RGKV 328
            GKV
Sbjct: 368 WGKV 371