Pairwise Alignments

Query, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

Subject, 385 a.a., cytochrome d oxidase subunit II from Agrobacterium fabrum C58

 Score =  168 bits (425), Expect = 2e-46
 Identities = 117/362 (32%), Positives = 176/362 (48%), Gaps = 39/362 (10%)

Query: 5   LPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFV-KGEQDRDVMMNTVAPVWDGNETWLVL 63
           L +IW +++   ++ + V  GFDLG G L PFV K + +R V++N++ PVW+GN+ WL+L
Sbjct: 12  LRVIWWLLLGVLLIGFAVTGGFDLGTGALLPFVAKTDIERRVVINSIGPVWEGNQVWLIL 71

Query: 64  GGAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADK-RHIWDKAFIWG 122
           GG  +F A+P  YAV     YL +   L  LI R V F++R K ++   R  WD A   G
Sbjct: 72  GGGAIFAAWPPLYAVSFSGFYLAMFATLFALILRPVGFKYRSKRESPAWRSGWDWALFVG 131

Query: 123 SLIATFFQGVALGAFLEG----FKVVDRHFAGGT--LDWLTPFSLFCGLGLIVAYTLLGC 176
             +     GVA+G  L+G    F    R F  GT   + L P++L CGL  +    + G 
Sbjct: 132 GFVPALIFGVAIGNVLQGVPFHFNDDLRIFYDGTTLFELLNPYALLCGLVSVSMLVMHGA 191

Query: 177 TWLIMKTEGPLQQKMHDMA--RPLALVLLVVIGIVSLWTPIAYPQIADR----------- 223
            WL++KTEGP+  +         LA  +L  +G V LW  +   +               
Sbjct: 192 AWLVLKTEGPVAARARSFGSIAALATTVLFALGGVFLWLGVDGYRFTSEVVTDGPSNPLS 251

Query: 224 ---------WF-SMPNLIWFMPVPLLVLV-TFYGLLKAVARNAHYTPFLLTLVLIFLGYS 272
                    WF +     W M  P L LV   +  +   AR       L + + IF   +
Sbjct: 252 KTVEVAGGVWFANYAAHPWMMLAPALGLVFPLFAFILFRARR-EVLALLSSSLAIFGIIA 310

Query: 273 GLGISLWPNIIPPSI------SIWDAAAPPQSQGFMLVGTLFILPFILMYTFWSYYVFRG 326
            +G++++P I+P S+      ++WDA++   +   MLV TL  +P I+ YT W Y V  G
Sbjct: 311 TVGLTMFPFILPSSVDPRSSLTVWDASSSHMTLFNMLVVTLIFVPMIVAYTSWVYRVLWG 370

Query: 327 KV 328
           KV
Sbjct: 371 KV 372