Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 496 a.a., DNA repair protein RadA from Xanthobacter sp. DMC5

 Score =  406 bits (1043), Expect = e-118
 Identities = 217/431 (50%), Positives = 289/431 (67%), Gaps = 5/431 (1%)

Query: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI 60
           MA+    + C  CGA + +W G+C  CG WNT+ E +  +  A+ P++ R+G  G+   +
Sbjct: 1   MARRDTSFICQSCGAVYARWQGKCEACGGWNTISEEVAVA--ASVPAAQRSGRKGRAVVL 58

Query: 61  KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAV-G 119
           + L E + +  PR  +   ELDRV GGG V GS++LIGGDPGIGKST+L+Q    +A  G
Sbjct: 59  EKL-EGTAKPAPRLVSGIGELDRVAGGGFVPGSILLIGGDPGIGKSTLLVQASAALAQRG 117

Query: 120 MPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKP-RVMVIDSIQT 178
              +YV+GEE+  QV +R++RLGL + ++ +  ET  E IIAT     P  ++VIDSIQT
Sbjct: 118 QRVVYVSGEEAVDQVRLRAQRLGLEKAEVGLAAETNAENIIATLSGGPPVHMVVIDSIQT 177

Query: 179 IFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVL 238
           ++++ ++SAPG V QVR S  LLVRYAKQ+G  + LVGHVTK+G +AGPRV+EHMVD V 
Sbjct: 178 MWSDSVESAPGTVTQVRTSAQLLVRYAKQTGACVILVGHVTKDGQIAGPRVVEHMVDAVF 237

Query: 239 YFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVM 298
            FEG+   + R+LRA KNRFG  +E+GVF MT RGL EV+NPS +FL+      PG+ V 
Sbjct: 238 SFEGDGGHQFRILRAQKNRFGPTDEIGVFEMTGRGLSEVANPSELFLSNRDAGAPGTAVF 297

Query: 299 ATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLN 358
           A  EGTRP+LVE+QALV  S L  PRR  +G D NRL+M+LAVL    G+     DV+LN
Sbjct: 298 AGMEGTRPVLVEIQALVAPSSLGTPRRAVVGWDPNRLSMVLAVLDARCGVRLGGHDVYLN 357

Query: 359 VVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAK 418
           V GG+K+ E A+DLA+ AA++SSL   PL    + FGE  L+G VRPV   Q RLKEAAK
Sbjct: 358 VAGGLKIGEPAADLAVAAALVSSLTGAPLPADAVHFGEASLTGAVRPVSQAQARLKEAAK 417

Query: 419 HGFKRAIVPKG 429
            GF  A++P G
Sbjct: 418 LGFASAVIPSG 428