Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 461 a.a., DNA repair protein RadA from Enterobacter asburiae PDN3

 Score =  556 bits (1433), Expect = e-163
 Identities = 283/459 (61%), Positives = 352/459 (76%), Gaps = 10/459 (2%)

Query: 1   MAKA-KRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGR----AGWTG 55
           MAKA KR + C ECGA +P+W GQC  C AWNT+ E     G AA+PS  R    +G+ G
Sbjct: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVR---GVAASPSVARNERLSGYAG 57

Query: 56  QQ--AQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTL 113
               A+++ L+++S+EE+PRF+T   E DRVLGGG+V GS +LIGG+PG GKST+LLQTL
Sbjct: 58  NAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTL 117

Query: 114 CNIAVGMPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVI 173
           C +A  M  LYVTGEES QQVAMR+ RLGLP   L +++ET IE I   A  E+P++MVI
Sbjct: 118 CKLAEQMKTLYVTGEESLQQVAMRAHRLGLPTGNLNMLSETSIEQICMIAEEEQPKLMVI 177

Query: 174 DSIQTIFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHM 233
           DSIQ +    +QS+PG VAQVRE+ A L R+AK  G AI +VGHVTK+GSLAGP+VLEH 
Sbjct: 178 DSIQVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHC 237

Query: 234 VDTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVP 293
           +D  +  +G++D R R LR+ KNRFGAVNELGVF MT++GL+EVSNPSAIFL+R  E   
Sbjct: 238 IDCSVMLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITS 297

Query: 294 GSVVMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQ 353
           GS VM  WEGTRP+LVE+QALVD S + NPRRV +GL+QNRLA+LLAVLHRHGG+   DQ
Sbjct: 298 GSSVMVLWEGTRPLLVEIQALVDVSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQ 357

Query: 354 DVFLNVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERL 413
           DVF+NVVGGVKV ET++DLALL A++SSLR+RPL   L+VFGE+GL+GE+RPVPSGQER+
Sbjct: 358 DVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERI 417

Query: 414 KEAAKHGFKRAIVPKGNAPKEAPAGLQVIAVTRLEQALD 452
            EAAKHGF+RAIVP  N PK+ P G+QV  V +L  AL+
Sbjct: 418 SEAAKHGFRRAIVPAANVPKKIPEGMQVFGVKKLADALN 456