Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 460 a.a., DNA repair protein RadA from Escherichia coli ECRC62

 Score =  562 bits (1449), Expect = e-165
 Identities = 279/454 (61%), Positives = 351/454 (77%), Gaps = 3/454 (0%)

Query: 1   MAKA-KRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQ-- 57
           +AKA KR + C ECGA +P+W GQC  C AWNT+ E  + +    A +   +G+ G    
Sbjct: 1   VAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV 60

Query: 58  AQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIA 117
           A+++ L+++S+EE+PRF+T   E DRVLGGG+V GS +LIGG+PG GKST+LLQTLC +A
Sbjct: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120

Query: 118 VGMPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSIQ 177
             M  LYVTGEES QQVAMR+ RLGLP D L +++ET IE I   A  E+P++MVIDSIQ
Sbjct: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180

Query: 178 TIFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTV 237
            +    +QS+PG VAQVRE+ A L R+AK  G AI +VGHVTK+GSLAGP+VLEH +D  
Sbjct: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240

Query: 238 LYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVV 297
           +  +G++D R R LR+ KNRFGAVNELGVF MT++GL+EVSNPSAIFL+R  E   GS V
Sbjct: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300

Query: 298 MATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFL 357
           M  WEGTRP+LVE+QALVD S +ANPRRV +GL+QNRLA+LLAVLHRHGG+   DQDVF+
Sbjct: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360

Query: 358 NVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAA 417
           NVVGGVKV ET++DLALL A++SSLR+RPL   L+VFGE+GL+GE+RPVPSGQER+ EAA
Sbjct: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420

Query: 418 KHGFKRAIVPKGNAPKEAPAGLQVIAVTRLEQAL 451
           KHGF+RAIVP  N PK+AP G+Q+  V +L  AL
Sbjct: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454