Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 461 a.a., DNA repair protein RadA from Dickeya dianthicola ME23

 Score =  559 bits (1441), Expect = e-164
 Identities = 279/458 (60%), Positives = 353/458 (77%), Gaps = 4/458 (0%)

Query: 1   MAKA-KRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPS---SGRAGWTGQ 56
           MAKA KR + C ECGA +P+W GQC  C AWNT+ E  + +  +++ S   SG AG +G 
Sbjct: 1   MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAAASSSSRSDRFSGYAGDSGN 60

Query: 57  QAQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNI 116
            ++++ L+E+S+E +PRF+T   E DRVLGGG+V GS +LIGG+PG GKST+LLQTLC +
Sbjct: 61  VSRVQKLSEISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL 120

Query: 117 AVGMPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSI 176
           A  M  LYVTGEES QQVAMR+ RLGLP   + +++ET IE I   A  E+P++MVIDSI
Sbjct: 121 AEQMKTLYVTGEESLQQVAMRAHRLGLPAQHINMLSETSIEQICLIAEQEQPKLMVIDSI 180

Query: 177 QTIFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDT 236
           Q +    +QS+PG VAQVRE+ A L R+AK  G AI +VGHVTK+GSLAGP+VLEH +D 
Sbjct: 181 QVMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDC 240

Query: 237 VLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSV 296
            +  +G++D R R LR+ KNRFGAVNELGVF MT++GL+E+SNPSAIFL+R  E   GS 
Sbjct: 241 SVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEITSGSS 300

Query: 297 VMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVF 356
           VM  WEGTRP+LVE+QALVD S +ANPRRV +GL+QNRLA+LLAVLHRHGG+   DQDVF
Sbjct: 301 VMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVF 360

Query: 357 LNVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEA 416
           +NVVGGVKV ET++DLALL +++SS R+RPL   L+VFGE+GL+GE+RPVPSGQER+ EA
Sbjct: 361 VNVVGGVKVTETSADLALLLSLVSSFRDRPLPQDLVVFGEVGLAGEIRPVPSGQERITEA 420

Query: 417 AKHGFKRAIVPKGNAPKEAPAGLQVIAVTRLEQALDAL 454
           AKHGFKRAIVP  N PK+ PA +QV+ V +L  AL  L
Sbjct: 421 AKHGFKRAIVPFANMPKKPPANMQVMGVKKLSDALTIL 458