Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

 Score =  404 bits (1039), Expect = e-117
 Identities = 215/433 (49%), Positives = 287/433 (66%), Gaps = 5/433 (1%)

Query: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI 60
           MAKAK  + C  CG    +WAG+C  CG WNT+VE     G  + P  G+    G+   +
Sbjct: 1   MAKAKTQFVCQNCGTVHNRWAGKCEGCGEWNTIVEEDPMGGIGSGP--GKVPKKGRPVTL 58

Query: 61  KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAV-G 119
            +L+   +EE PR  T  +ELDR  GGG V GS VLIGGDPGIGKST+L+Q    ++  G
Sbjct: 59  TSLSG-EIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRRG 117

Query: 120 MPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIAT-ARVEKPRVMVIDSIQT 178
              +YV+GEE+  QV +R++RLG     + +  ET +E I+AT +  ++P +++IDSIQT
Sbjct: 118 HRVIYVSGEEAVAQVRLRAQRLGSADTDVLLAAETNVEDILATVSEGKRPDLIIIDSIQT 177

Query: 179 IFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVL 238
           ++++   SAPG V QVR     ++R+AKQ+G  + LVGHVTKEG +AGPRV+EHMVD VL
Sbjct: 178 LWSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRVVEHMVDAVL 237

Query: 239 YFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVM 298
           YFEG+     R+LR VKNRFG  +E+GVF M+D GL+EVSNPS +FL    E+ PG+ V 
Sbjct: 238 YFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERNEKSPGAAVF 297

Query: 299 ATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLN 358
           A  EGTRP+LVEVQALV  + L  PRR  +G D +RLAM+LAVL  H G+     DV+LN
Sbjct: 298 AGIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVKLGQHDVYLN 357

Query: 359 VVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAK 418
           V GG ++ E A+D+A+ +A++SSL    L    + FGEI LSG VRPV    +RLKEA K
Sbjct: 358 VAGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVAHTVQRLKEAEK 417

Query: 419 HGFKRAIVPKGNA 431
            GF  A++P G+A
Sbjct: 418 LGFSAALLPSGSA 430