Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  114 bits (285), Expect = 3e-30
 Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 6/289 (2%)

Query: 4   KQLRSFIEVVHRGGFTQAAQTLHISQSAVSKQVAQLEQDVGQPLLERQASHLHLTAAGRI 63
           + +++F+ V   G FT+AA  LH+S SA++ QV QLE  +G  LL+R   H+ +TAAG+ 
Sbjct: 6   QHIQAFLAVARTGSFTKAANELHLSPSALTVQVQQLEDWLGVALLDRSPRHVSITAAGQD 65

Query: 64  VLERGEALLRQRQALLNELDDLSQMERGELRL-GLPMLGSDTLFAGLFAEYRRRHPNIAI 122
                E LL     ++    DL+ + RG + +  LP + +  L   +   +R R   I +
Sbjct: 66  ARGPMEKLLLDLDNIVTGSRDLAALRRGVVTIAALPSVCAGAL-PPVLRLFRERFAGIEV 124

Query: 123 QLLEGGSRSVEQAVRSGELELG-GCLTPTDEAFDYQPFCNEPLDALLPAGHALAGLDAVG 181
           +L +  +  +   VRSGE++ G G         ++ P  N+ L A +P  H L     + 
Sbjct: 125 RLHDLVAHRIHAQVRSGEVDFGIGVRARLSHGLEFVPVLNDRLCAFVPLDHPLTRFPQLT 184

Query: 182 LGQLADTPFLLYQRSFVLNDRLLKACQQQGFTPKEGGRSGQADFLAALVAAGQGVVMLPR 241
           L QLAD P +L  R   + +++     Q   T   G  +     + ALV  G G+ +LP 
Sbjct: 185 LEQLADQPIILTGRDSSVREQVDALFDQTRLTLNAGMEANYMSTVLALVRQGLGISVLPE 244

Query: 242 VVAKVLERPGVVRVPLHAQEDLRWDIAFIWRRGAYLSRAAQAWLALLRE 290
             A  LE  G+ R+ +     +  +I  I R G  LS AAQ    LL +
Sbjct: 245 SAADSLE--GLKRINIE-HPGVNREIGLISRSGMGLSPAAQRCFDLLHD 290