Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

 Score =  223 bits (569), Expect = 3e-63
 Identities = 119/290 (41%), Positives = 176/290 (60%), Gaps = 1/290 (0%)

Query: 1   MEFKQLRSFIEVVHRGGFTQAAQTLHISQSAVSKQVAQLEQDVGQPLLERQASHLHLTAA 60
           MEF+ LRSF EVV  GGF+QAA++L  +QS +SK V QLE ++G  LL+R      +T A
Sbjct: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRSGHRCVMTPA 62

Query: 61  GRIVLERGEALLRQRQALLNELDDLSQMERGELRLGLPMLGSDTLFAGLFAEYRRRHPNI 120
           G +V  RG  LL  R  +L ELD++  ++RG LRLG+P +G+  LFA +   YR R+P I
Sbjct: 63  GEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGIPSVGNIKLFAPVVCTYRERYPQI 122

Query: 121 AIQLLEGGSRSVEQAVRSGELELGGCLTPTDEAFDYQPFCNEPLDALLPAGHALAGLDAV 180
            ++L+E GS  +E+ +R+G++++ G L P    F+++P  ++P+ ALL + H L+   ++
Sbjct: 123 ELRLIEHGSNQLEKHLRAGDIDIAGILEPQSPDFEWEPIRSKPIVALLSSVHPLSRCGSL 182

Query: 181 GLGQLADTPFLLYQRSFVLNDRLLKACQQQGFTPKEGGRSGQADFLAALVAAGQGVVMLP 240
            L  L D PF+L+   F L+  +L A ++ GF P     S Q DF+  LV+   GV  LP
Sbjct: 183 KLTDLRDVPFVLFDLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTNVGVAFLP 242

Query: 241 RVVAKVLERPGVVRVPLHAQEDLRWDIAFIWRRGAYLSRAAQAWLALLRE 290
             +       G+V VPL  + +L W +   WRR AYLS A  AW+ L+RE
Sbjct: 243 SEIVDEKHLQGIVSVPLD-EAELAWVMGHAWRRNAYLSDATVAWMKLMRE 291