Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 1e-27
 Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 6/246 (2%)

Query: 1   MEFKQLRSFIEVVHRGGFTQAAQTLHISQSAVSKQVAQLEQDVGQPLLERQASHLHLTAA 60
           ME + LR FI V     F +AAQ L ISQ  +S+Q+  LEQ++G  L +R    + L+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GRIVLERGEALLRQRQALLNELDDLSQMERGELRLGLPMLGSDT-LFAGLFAEYRRRHPN 119
           GR+ LE    +L Q +   +        E GE+++G       T         +R+R P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 120 IAIQLLEGGSRSVEQAVRSGELELGGCL-TPTDEAFDYQPFCNEPLDALLPAGHALA-GL 177
           + + L E  SR V + V    +E+G     P  E         EPL A++ A H LA G 
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGT 180

Query: 178 D-AVGLGQLADTPFLLYQRSF--VLNDRLLKACQQQGFTPKEGGRSGQADFLAALVAAGQ 234
           +  V +  LA  PF+ + RS+   L+ +LL   +  GF+P     +G+A  +  LV+AG 
Sbjct: 181 EQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGL 240

Query: 235 GVVMLP 240
           GV +LP
Sbjct: 241 GVSVLP 246