Pairwise Alignments

Query, 277 a.a., Hmg transcriptional repressor from Pseudomonas putida KT2440

Subject, 259 a.a., IclR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  405 bits (1040), Expect = e-118
 Identities = 210/254 (82%), Positives = 227/254 (89%), Gaps = 4/254 (1%)

Query: 7   PTDTGKQKVRSAEVGTDILKALAELSPSTSLSRLAEHVQMPASKVHRYLQALIASGFAEQ 66
           P DTGKQKVRSAEVGTDILKALAELSP+TSLSRLAEHVQMPASKVHRYLQALIASGFAEQ
Sbjct: 4   PRDTGKQKVRSAEVGTDILKALAELSPATSLSRLAEHVQMPASKVHRYLQALIASGFAEQ 63

Query: 67  DAATNHYGLGREALRVGLAALGSIDVLKVAAMPLSQLRDELNESCFIAVWGNQGATVVSI 126
           + ATNHYGLGREALRVGLAALGS+DVLKV AMPL++LRDELNE+CF+AVWGNQGATVV I
Sbjct: 64  NTATNHYGLGREALRVGLAALGSMDVLKVGAMPLAELRDELNETCFLAVWGNQGATVVQI 123

Query: 127 EPAVRAVTVVTQIGSVLPLLSSSTGLVFAAYLPERETQELRDREL-AALQQTASD---YH 182
           EPAVRAVTVVTQ+GSVLPLLSSSTGLVF+AYLP RET ELR+RE+ A +    +D   Y 
Sbjct: 124 EPAVRAVTVVTQLGSVLPLLSSSTGLVFSAYLPSRETVELREREIQAGIAHALADDQAYA 183

Query: 183 TLLAGIREKGLHHVHGLLMPGVDALSAPVFNAMGQIAAVMTVVGPTSIFHADEHGPAAQS 242
           T    IR +GLH VHGLLMPGVDALSAPVFNA+GQ+AAVMTVVGPTS+FHADE GPAAQ 
Sbjct: 184 TTCEQIRSRGLHFVHGLLMPGVDALSAPVFNAIGQVAAVMTVVGPTSLFHADEDGPAAQH 243

Query: 243 LLTAARTVSWRMGY 256
           LL A R VSWRMGY
Sbjct: 244 LLAATRAVSWRMGY 257