Pairwise Alignments

Query, 277 a.a., Hmg transcriptional repressor from Pseudomonas putida KT2440

Subject, 272 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 2e-32
 Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 4/249 (1%)

Query: 11  GKQKVRSAEVGTDILKALAELSPSTSLSRLAEHVQMPASKVHRYLQALIASGFAEQDAAT 70
           G++ V S EV   +L+A+ +L+    L  LA+   +  +K+HRYL +L   G   Q   T
Sbjct: 17  GRRGVESVEVAGKVLQAMVQLAGKARLKVLADATGIAPAKLHRYLVSLQQVGLVRQIQET 76

Query: 71  NHYGLGREALRVGLAALGSIDVLKVAAMPLSQLRDELNESCFIAVWGNQGATVVSIEPAV 130
             Y LG  + ++G  A    D++ + A  +++   +L E+C +A+W  QG T+V      
Sbjct: 77  QEYALGILSYQLGELAQQGADIVDMVAPAVAEFSRQLGEACGVAMWMQQGVTIVRWFGVH 136

Query: 131 RAVTVVTQIGSVLPLLSSSTGLVFAAYLPERETQELRDRELAAL----QQTASDYHTLLA 186
           R V++  + G+V+ + +S TG V AA+ P   T+ L  ++L        +     + L  
Sbjct: 137 REVSITLRPGTVVNITTSCTGCVVAAHQPRTLTEPLVRKDLQKAGRLDAKAVEQVYGLYE 196

Query: 187 GIREKGLHHVHGLLMPGVDALSAPVFNAMGQIAAVMTVVGPTSIFHADEHGPAAQSLLTA 246
            IR  G+   HG  + G++ALS PVFN  G+ A  +T +G  S F A      A+ L   
Sbjct: 197 QIRRDGIAASHGTRIVGINALSVPVFNRFGEPALAVTALGHESTFPALPDSAEAEKLKDL 256

Query: 247 ARTVSWRMG 255
            R ++  MG
Sbjct: 257 GRRLTANMG 265