Pairwise Alignments

Query, 277 a.a., Hmg transcriptional repressor from Pseudomonas putida KT2440

Subject, 280 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

 Score =  139 bits (351), Expect = 5e-38
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 11/263 (4%)

Query: 4   ASSPTDTGKQKVRSAEVGTDILKALAELSPSTSLSRLAEHVQMPASKVHRYLQALIASGF 63
           A  P +  ++ ++S E+GT +L AL       +L  L +   +P  K H YL + +  GF
Sbjct: 12  AGRPMEKPRRGIQSVEIGTQLLVALGRHVAPMALRDLGKAAGVPVGKAHPYLVSFLKVGF 71

Query: 64  AEQDAATNHYGLGREALRVGLAALGSIDVLKVAAMPLSQLRDELNESCFIAVWGNQGATV 123
             QD A   Y LG  AL++GLA L  +D ++ A+  +  L  E  +S  +AVWGN G TV
Sbjct: 72  VVQDGA-GRYELGPLALQLGLAKLQRLDPIREASPLIEALASETEQSIAVAVWGNFGPTV 130

Query: 124 VSIEPAVRAVTVVTQIGSVLPLLSSSTGLVFAAYLPERETQELRDRELA----------A 173
           V +E  +  + V  + G+V+ L  ++TG +FAAYLP +  +++   +LA           
Sbjct: 131 VRLEEPIHPLHVNLRTGTVMSLAYTATGRLFAAYLPPKVVEKMMLEDLARTRPADGRGST 190

Query: 174 LQQTASDYHTLLAGIREKGLHHVHGLLMPGVDALSAPVFNAMGQIAAVMTVVGPTSIFHA 233
            + + S    LL   R  G+    G  +PG+DA  APVF++   +   +T +GP + F +
Sbjct: 191 TELSHSQIEALLVETRLHGMSRTLGQPIPGIDAFCAPVFDSTNNLVLGITAMGPEATFDS 250

Query: 234 DEHGPAAQSLLTAARTVSWRMGY 256
           D +G  A  L   A  +S R+G+
Sbjct: 251 DWNGRVAVPLKACALEISRRLGF 273