Pairwise Alignments

Query, 268 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 283 a.a., Protein sirB1 from Variovorax sp. SCN45

 Score = 89.4 bits (220), Expect = 8e-23
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 24/260 (9%)

Query: 18  LLEAALWIAAEHDPGVEPAASLAALHDLQREISANLPM--LPLCELA---QPLLRQLNAL 72
           LLEAA  +A +  P ++    L  +  L   +   LP    PL  L    Q     LN  
Sbjct: 26  LLEAAASLAQDEYPDLDVQQVLGDVDQLLARLKRRLPADAAPLARLRALNQFFFNDLNFG 85

Query: 73  GFQQDEYHPLRPHAAMMDKVLQRRRGQPLTLAILALELARRLSIPLEGVGFPGHFLLRV- 131
           G   D Y P   +   ++ VL+ RRG P++LA+L +ELA+ L +   G+GFPGHF+L+V 
Sbjct: 86  GNLNDYYDPDNSY---LNAVLRTRRGIPISLAVLWMELAQGLDLQARGIGFPGHFMLKVT 142

Query: 132 -PGADHLLDPCGGR---------RLYPSDCRELLARQFGPHLALTAEHLRSASPLQMLQR 181
            P    ++DP  G+         RL P      L   F   L L   +L+ AS  +++ R
Sbjct: 143 LPKGQVVIDPFTGKSLSREELGERLEPYKRSNGLVGDFDVPLGL---YLQPASSREIIAR 199

Query: 182 LSRNLRQLHISNDNHLAALIDSERIMQLGPVQVSDYMTRASLY-HHLDCPQAERFDLEHA 240
           + RNL+++H + ++    +   +R++ L P    +Y  R   +    +  QA R DLE  
Sbjct: 200 MLRNLKEVHHAQEDWQRVIAVQDRLIALLPGAWGEYRDRGIAHAEQGNTTQAVR-DLETY 258

Query: 241 LLLTEDPVQRLKLSERIGKL 260
           L   ED +    ++ER+  L
Sbjct: 259 LSKAEDALDIDAIAERVAAL 278