Pairwise Alignments

Query, 774 a.a., outer membrane ferric citrate porin from Pseudomonas putida KT2440

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 2e-37
 Identities = 191/841 (22%), Positives = 327/841 (38%), Gaps = 126/841 (14%)

Query: 2   PLRPNPFVHALLLTTTLGLAMPAAQAETRS-----YHIAAGSLEDALNQFGRESGALISF 56
           PL P     A+       L + +  AE  S     + I AG L  ALN    ++G +++F
Sbjct: 7   PLHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAF 66

Query: 57  GSQLTQGMSTQGLDGQYDTRQGLDALLRGSGLQARQETDNAFSLQPITAPAAGAAVELGA 116
            + LT+G  +QGL GQYDT   L  LL GSGLQA + + + + L+ I  P  G A+EL A
Sbjct: 67  DASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESI--PDNGGAMELQA 124

Query: 117 STVVGDWLAEAQQDNV------------------FEHPGARDVVRREEFERNGATTAREV 158
           +T+ G + AE+    V                   E P +  +V +++     A +  ++
Sbjct: 125 TTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQI 184

Query: 159 LNRIPGVNAPDNNGTGSHDLALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAP 218
           L R      P+  G  +  L     IRG +P         +DG+ +P +    PQ     
Sbjct: 185 L-RYSAAVIPETRGATASRLD-QLTIRGFSP------ATYLDGLRMPSSRDALPQKDAF- 235

Query: 219 LSMGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEQATFKAAMQNQISPSSSHEGFK 278
               +++ V+V+RG  +V YG     G++N V++  P    F     +++         K
Sbjct: 236 ----DLERVEVLRGPASVLYGQGTPSGVINMVSKR-PLDTPF-----HEVGVEYGTFNKK 285

Query: 279 NSANLLVGGTNDNGLGGALLYSGTRGGDWR-EHSDTQIDDLILKGKLQLDEANSLHAMAQ 337
            +   L G  +D G+    +       D + EH++T+   L      + D+A SL  +  
Sbjct: 286 RTTFDLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGH 345

Query: 338 YYEGEADMPGGLSTA-----------DFDADPYQSTRLKDKF--------WGRRTLFNFG 378
           + +       G   A             D D Y   +  +K         W     F+  
Sbjct: 346 FQKDPKGASYGSVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDV 405

Query: 379 YDYKQDDR----QFSVNSFFTKTLRSGYLDQGSFVSLSPREYWVRGIETRFSQGVALGDS 434
           +  +Q+ R    +    S ++  L + Y         S  +     ++ +       G  
Sbjct: 406 WTVRQNARYLRSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPL 465

Query: 435 WHELGIGYRYVN------------EAGHELRFREPVNG-SLPTTASRNDRDTRGSTEAHA 481
            H L +G  Y N             AG  L    PV G ++P  A   D  +R  +E   
Sbjct: 466 QHTLLMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSR--SEQTG 523

Query: 482 IYLDDRIDIGRWTITPGVRYEMIDSEQSNKL--NGQRYQGSYNTA--LPALNVMYHLTDS 537
           +YL +++   +W +  G RY+   ++ S +   +G + + S ++      + ++Y   + 
Sbjct: 524 VYLQEQMKWDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNG 583

Query: 538 WNLYANTEGSFGSVQYSQMPNRVSSGEVKPEKARTWEVGTRYDNGDLQAEIGAFLINFDN 597
              YA+   SF      Q          KP + + +E+G +Y      + I A +  FD 
Sbjct: 584 LAPYASYAESFN----PQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAI--FDL 637

Query: 598 QYESNQTND----SVIARGETRHQGIETSVR-YALDGLSPALAGFDVHASYAFVDATIRE 652
           +  +  T D     +   G  + Q  E   R + L+G +      D+ A+YA++D  I +
Sbjct: 638 RQTNVLTTDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISK 697

Query: 653 DGPNKGNQVPFSS------------------RHKGNLGVGYTEGPWQLNLDGSFQSSQYA 694
              N     P S                   RH  +    YT    +L   G    ++Y 
Sbjct: 698 SN-NTVRYAPISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYV 756

Query: 695 DNANTSTESADGSTGRIPGYMLVSTRAGYDFGPQLS----NLKVAVGVKNLFNREYYTRS 750
            ++   T     +T ++PGY L      YD  P ++    NL++A+   NL N+EY    
Sbjct: 757 GSSWGDT----ANTLKVPGYTLFDAAVHYDI-PNIARLKDNLRLALNATNLANKEYVASC 811

Query: 751 Y 751
           Y
Sbjct: 812 Y 812