Pairwise Alignments

Query, 308 a.a., putative FecR protein from Pseudomonas putida KT2440

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 23/246 (9%)

Query: 51  QQVNQRLRGVSSPVVHATLQAPQSSARRRALKALLL--VGMASATGLGLQQHNPLPGMMA 108
           +QV QRL GVS  +V   +       R R  +A +   V +  A   G QQ    P ++A
Sbjct: 139 KQVAQRL-GVSESMVAKYIGQALRHCRGRLKQAGVAASVVLLVAAVAGWQQ---APILLA 194

Query: 109 DYRSPVGQRRRMQLGDGSVLQLNTRSAADVRFDGQQRLVHLFEGELALQVASDARPLQLR 168
           DY + VG+R+ + L DG+ + LN+ SA  V F   +R V L  GE   + A D+RP  + 
Sbjct: 195 DYHTAVGERQVITLTDGTRVTLNSASALSVAFSEHERRVVLDAGEALFETADDSRPFVVE 254

Query: 169 TGEGVLYLDSGRFNVRQFDGYSLVSVFEGGASAHGQPLMAGQQARFTGAWRSVSALDRNV 228
           T    +  ++  F+V Q DG+ +++  E     H   + A    +               
Sbjct: 255 TAGARVQGNAATFSV-QRDGHVVLARGEAKVGEHELAVAADAGTQM-------------- 299

Query: 229 GAWVDGMLVASQMRLADFLAELGRYRHGQLGCSE-QVADLRISGSYPLDDSERILQMLEV 287
            AW  G L+ +   L   L EL RYRHG++  S+ ++A + +SG + LD+ E +L+ LE 
Sbjct: 300 -AWQRGKLIFNGKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQ 358

Query: 288 ALPVRV 293
              ++V
Sbjct: 359 RYGLKV 364