Pairwise Alignments

Query, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 166 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 64.7 bits (156), Expect = 8e-16
 Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 19  YHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRVLCNH 78
           +  H+  L G   RRL     A DLA DT++R+L+++ + ++ +PRA+L   A+ +  + 
Sbjct: 11  FFEHYEELIGTWTRRLRNRQQAEDLAHDTFVRVLESKSS-EVEQPRAYLHQTARNIAVDA 69

Query: 79  FRRQELERAY-LQALAQ-VPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLAQV 136
           +RR++   A  L+A  Q  P    P     AI  +   +++  L  LP   ++ F+  ++
Sbjct: 70  YRREDRREAITLEAFDQRSPNSGDPEHFMHAI--QLADSIERALSELPLNCRKIFIWQKI 127

Query: 137 DGLGQGEIARELGISLATVKRYL 159
           +GL Q EIA  LG+S   V++Y+
Sbjct: 128 EGLTQQEIAERLGLSKNMVEKYM 150