Pairwise Alignments

Query, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 2e-17
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 22  HHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRVLCNHFRR 81
           ++  L  +L  RLG   +A D+A D Y+R+L+   + Q+  PRAFL   A  ++ +  RR
Sbjct: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63

Query: 82  QELERAYLQALAQVPEEVAPCEEQKAIIFETLLAL-DHLLDGLPPLVKRAFLLAQVDGLG 140
           Q + +A           +   E Q  +  +  LAL    LD L    + +FLL +++GL 
Sbjct: 64  QLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLS 123

Query: 141 QGEIARELGISLATVKRYLNKAAMRC 166
             +IA  LGIS + V++++  A   C
Sbjct: 124 HQQIAERLGISRSLVEKHIVNAMKHC 149