Pairwise Alignments

Query, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

 Score =  136 bits (342), Expect = 2e-37
 Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 1/158 (0%)

Query: 10  ALTSTVEGLYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLV-EPRAFLA 68
           +L   V+ LY  HH WL GWL R+LG    AADLA DT++RLL  +  P    EPRA L 
Sbjct: 7   SLNLQVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLT 66

Query: 69  TVAKRVLCNHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVK 128
            +AK ++ + +RRQ++ERAYL+A+A +P+   P  E + +I ETL  +D +L  +P  V+
Sbjct: 67  HIAKGLVVDRWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVR 126

Query: 129 RAFLLAQVDGLGQGEIARELGISLATVKRYLNKAAMRC 166
           + FLL+Q+DGL   +IA +L +SL T+KR +  A + C
Sbjct: 127 QVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTAFLAC 164