Pairwise Alignments

Query, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 331 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 7e-33
 Identities = 100/315 (31%), Positives = 146/315 (46%), Gaps = 23/315 (7%)

Query: 7   ITEAQFQA----ALQWFNRINEQPGQA-EGAAFKRWLLADPAHRAAYDQAQVLWQKSAAP 61
           ++EA++ A    A  W  R++     A E  AF++W  A P H   Y     +W  +   
Sbjct: 6   LSEAEYDAITDAAAHWCMRLHAVDCTASERQAFEQWHDAHPLHAFEYAAMLEIWDVA--- 62

Query: 62  AARLADEEQDALQRYLDAMARPPARGGWR-RVAGLALAACLV-LAVGVAGGWHPGYWLQD 119
                    D L R        P +   R R   +A A CLV L +    GW  G WL  
Sbjct: 63  ---------DHLPRNEPTATVVPFKPRRRLRTYAVAAAICLVALPLAAFTGWEAG-WLPS 112

Query: 120 LQADYSSTGQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTH-TGEPF 178
               + +T  +RQV L D SQV L+ G+ +     + +RRV L  G AFF+V+H T  PF
Sbjct: 113 SYERFDATHGLRQVTLGDGSQVELNLGTQLVYSNYKDQRRVTLKKGEAFFKVSHDTAHPF 172

Query: 179 LVEAAGGEVRVLGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRV 238
           +V A  G+VRV GTQF V +  +  +VT+  G V +S  +   +  LT   Q  Y+ G  
Sbjct: 173 IVHAGEGQVRVTGTQFNVWKYEDQVRVTLLEGSVQISSDKVHGSVPLTPGMQANYQHGDA 232

Query: 239 GDTLAVDS--DNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFP 296
              +   S  D  LAWRQG L    + LA  +  + RY    ++L D + G  ++ G + 
Sbjct: 233 TPRVRTMSPNDTALAWRQGKLILDNLALADALPLINRYLSKPVMLADANTGTIRIGGIYN 292

Query: 297 VAEPLLALDSLGKVM 311
           + E    + SL KV+
Sbjct: 293 INEVNNLVPSLPKVL 307