Pairwise Alignments

Query, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  103 bits (258), Expect = 4e-27
 Identities = 90/310 (29%), Positives = 138/310 (44%), Gaps = 18/310 (5%)

Query: 15  ALQWFNRINE-QPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAA-PAARLADEEQDA 72
           A QWF R+ + +   AE   F  W    P H+  +D  Q LW  +   P ARL       
Sbjct: 9   AAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATGLLPKARL------- 61

Query: 73  LQRYLDAMARPPARGGWRRVAGLALAACLVLAVGVAGGW-HPGYWLQDLQADYSS-TGQI 130
            Q   +A    P R    R A  A    + L +G+  G  HP    +   A++S+  G+ 
Sbjct: 62  -QALCEAPVERPKRRAVLRYAVAAGVIAVALGLGLFSGLDHP----KPYSAEFSTGVGEH 116

Query: 131 RQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTH-TGEPFLVEAAGGEVRV 189
           RQV L D S + L++ + +AV + +G R V L  G A F V H T  PF+V A  G+V V
Sbjct: 117 RQVALPDGSVMDLNSRTVVAVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAAGAGQVTV 176

Query: 190 LGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQL-TYRAGRVGDTLAVDSDN 248
            GT+F+VR      +V V +G V V          LTA         G V     V+++ 
Sbjct: 177 TGTRFDVRRDEGQTRVMVEAGTVKVQGDSPDNLVTLTAGLGTHVDNKGSVAAAYTVNTEE 236

Query: 249 RLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALDSLG 308
             AWR G L +    L +V  ++ RY    + +    +G  +++  F   +    L +L 
Sbjct: 237 LTAWRTGKLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKANDTDALLKALP 296

Query: 309 KVMGFSRQTV 318
            ++  + +T+
Sbjct: 297 HILPVALRTL 306