Pairwise Alignments

Query, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 330 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 1e-28
 Identities = 93/304 (30%), Positives = 137/304 (45%), Gaps = 27/304 (8%)

Query: 5   PPITEAQFQAALQWFNRINE-QPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAAPAA 63
           P    A  + A +W  R++    G+AE  A  RW  ADPAH  A+ +A+ L +K  A  A
Sbjct: 8   PAPDAAVLREAARWLVRLHSGDAGKAEQDACLRWRSADPAHEQAWQRAERLSRKFGAVPA 67

Query: 64  RLADEEQDALQRYLDAMARPPARGGWRRVAGLALAACLVLAVGVAGGWHPGYWLQDLQAD 123
            +           +  +AR       RR A   LA    +A     GW    W      +
Sbjct: 68  TVG----------MPVLARQARTN--RRAAMRTLALLATVAPAAYLGWRHAPWQAWASDE 115

Query: 124 YSSTGQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFF------EVTHTGEP 177
            ++TG+ R+V LAD S++ LD  SA+ + F   +R +RL  GA         +    G P
Sbjct: 116 RTATGERREVKLADGSRMLLDTASAVDIRFDGRQRTIRLRAGAISIVTAPDPQTGERGRP 175

Query: 178 FLVEAAGGEVRVLGTQFEVREQGEG-----AQVTVRSGRVGVSPAQGTV-ARELTANQQL 231
           F+VE   G +R LGT+F VR++G+       +V V  G V ++    T  A  L A QQ 
Sbjct: 176 FVVETVQGRLRALGTRFTVRQEGDAQDGGPVRVAVTEGAVEITLRDATAPALVLPAGQQT 235

Query: 232 TYRAGRVGDTLAVDSDNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKV 291
              A        VD  ++  W QG L    + LA    +L RY PG I+    ++   ++
Sbjct: 236 VLTAEGAAARQPVDPQSQ-GWIQGVLYADNMRLADFCAELARYRPG-IVRCAPEVAGLRI 293

Query: 292 SGSF 295
           SG+F
Sbjct: 294 SGAF 297