Pairwise Alignments

Query, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score =  100 bits (249), Expect = 6e-26
 Identities = 76/223 (34%), Positives = 108/223 (48%), Gaps = 28/223 (12%)

Query: 91  RVAGLALAACLVLAVGVAGGWHPGYWLQDLQADYSSTGQIRQVI-LADQSQVTLDAGSAI 149
           R+    +AA +VL V    GW        L ADY +    RQVI L D ++VTL++ SA+
Sbjct: 166 RLKQAGVAASVVLLVAAVAGWQQA---PILLADYHTAVGERQVITLTDGTRVTLNSASAL 222

Query: 150 AVDFAQGERRVRLLHGAAFFEVTHTGEPFLVEAAGGEVRVLGTQFEVREQGEGAQVTVRS 209
           +V F++ ERRV L  G A FE      PF+VE AG  V+     F V+          R 
Sbjct: 223 SVAFSEHERRVVLDAGEALFETADDSRPFVVETAGARVQGNAATFSVQ----------RD 272

Query: 210 GRVGVSPAQGTVARELTANQQLTYRAGRVGDTLAVDSDNRLAWRQGWLNYYQVPLAQVID 269
           G V ++  +  V     A              +A D+  ++AW++G L +   PL QV+ 
Sbjct: 273 GHVVLARGEAKVGEHELA--------------VAADAGTQMAWQRGKLIFNGKPLGQVLT 318

Query: 270 DLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALDSLGKVMG 312
           +L RY  GRI+L D  L   +VSG F + EP   L +L +  G
Sbjct: 319 ELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYG 361