Pairwise Alignments

Query, 291 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 295 a.a., HTH-type transcriptional activator RhaR from Xanthobacter sp. DMC5

 Score = 89.4 bits (220), Expect = 9e-23
 Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 5/217 (2%)

Query: 75  PDKLCVMPAGQESNWVVNGAIRLAHLYVSEAQFALGCVRLLDREPRELQLQEATFLDDP- 133
           P +  ++P  + S W  +G   +  LY+ + +      R+       ++L+    ++DP 
Sbjct: 75  PRQFHLIPGLEASEWHRHGRSEMLTLYLRQERLDEMAGRICSAHVGRVELEVPLGVNDPL 134

Query: 134 -QQAGRFRQLIQLDWDEPGERLLASSLAHEIVDHALLSQVGLRQGLRL---KGGLAPNLR 189
            +Q       +  D ++   ++ A  LAH    H + S     +  R+    G    +L 
Sbjct: 135 LEQLALSVLTVLRDREDGSSQIYADELAHAAYAHVVRSYTTAGRSSRIGEDTGAAPEHLL 194

Query: 190 RQLVDYLEAHLDQPITLDELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249
            ++ + +   L + + LD LA    LS    +R+F   FG+  HQY+L++R+ RA +LL 
Sbjct: 195 HRVCEMIADRLAEELPLDLLACEAGLSPRSLSRVFNRRFGMSVHQYILSQRILRAKELLI 254

Query: 250 LGVMPLGEIALLCGFASASHFSNRFRQALGATPGEYR 286
              +P+ E+AL  GF+S SH +  FR+ +G TPG +R
Sbjct: 255 STDLPIAEVALETGFSSQSHLAATFRKHMGVTPGLFR 291