Pairwise Alignments

Query, 279 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 252 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  395 bits (1015), Expect = e-115
 Identities = 195/252 (77%), Positives = 216/252 (85%), Gaps = 3/252 (1%)

Query: 20  MTDTPLATLYQSLDQHRPATLEALLAGVSLLLPMLDAIPNAAIFIKDSAARYALANNTLV 79
           M  +  ATL Q      P  +E LL  V+ LLPMLD IPNAAIFIKD+ ARY LAN TLV
Sbjct: 1   MMQSAFATLCQGSS---PQDIEQLLGSVAQLLPMLDVIPNAAIFIKDTHARYVLANRTLV 57

Query: 80  QRCGLKRLQPLLGKTSAEVFPAQFGPGYTEQDRRVLKEGLVLEDQLELHLYGSREPGWCL 139
           QRCGLK+LQPLLGKTSAEVFPAQ GPGYTEQDRRVL++G VLEDQLELHLYG+REPGWCL
Sbjct: 58  QRCGLKQLQPLLGKTSAEVFPAQLGPGYTEQDRRVLEQGFVLEDQLELHLYGTREPGWCL 117

Query: 140 THKRPLYNPAGEIIGLVGISVDLQSAADSHPAYQRLAAVDEHIRQHFHQPISMSELTRIA 199
           THK PLYN  G IIGL GISVDLQ+A++SHPAYQRLAAVD HIR HF++ +++ ELTRIA
Sbjct: 118 THKWPLYNHTGAIIGLAGISVDLQTASESHPAYQRLAAVDAHIRAHFNRRVTLGELTRIA 177

Query: 200 GISVAQLERYCKRVFHLTPRQMIHKARLEHAHRLLHSELPITEVAMRCGYTDHSAFSRQF 259
           GISVAQLERYCKRVFHLTPRQMI K RLEHAHRLLH++LPITEVA++CGYTDHSAF+RQF
Sbjct: 178 GISVAQLERYCKRVFHLTPRQMIQKVRLEHAHRLLHTDLPITEVALQCGYTDHSAFTRQF 237

Query: 260 KQLTGFTPRQYR 271
           K  TGFTPRQYR
Sbjct: 238 KASTGFTPRQYR 249