Pairwise Alignments

Query, 279 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 326 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 173 QRLAAVDEHIRQHFHQPISMSELTRIAGISVAQLERYCKRVFHLTPRQMIHKARLEHAHR 232
           + +    E I  H+ + I++ +L  +  +S    ER  K++   T  +   + ++E A R
Sbjct: 217 EEIRKAQEFIEHHYDEKITVDQLAEMVALSRRSFERRFKQMTGNTVIEYFQRVKIEAAKR 276

Query: 233 LLHSELP-ITEVAMRCGYTDHSAFSRQFKQLTGFTPRQYR 271
              S    I+EV    GY+D  AF   FK++TG TP +YR
Sbjct: 277 CFESSRKNISEVMFEVGYSDSKAFRGVFKKITGLTPIEYR 316



 Score = 23.9 bits (50), Expect = 0.005
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 254 AFSRQFKQLTGFTPRQYRQ 272
           +F R+FKQ+TG T  +Y Q
Sbjct: 249 SFERRFKQMTGNTVIEYFQ 267