Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 4/280 (1%)

Query: 4   KQLKFLIALDQTRHFGQAAALCHITQPTLSMRLRNLEDELDLVLVKRGQRFEGFTEAGER 63
           + + + +A+ +   F +AA+  H++QP LS ++R LE+ L + L  R  R    T+AGE 
Sbjct: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63

Query: 64  ILAWARTLLAAHDGLQAEAASCRGQVVGSLRLGTVP-LASFNPMHLLLPLREKYPELHFQ 122
              +A   L      +           GSLR+   P   S+    L+     +YP +  Q
Sbjct: 64  WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123

Query: 123 LSSLSSEQVIDGLSRNQLDLGICYLDQVNTSFFEVIELGTTTMGLLHDTRHFQFTSDRLR 182
           L  +S E++ D L R++LD+GI +   V++   E I L T ++ L+    H     +++ 
Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFA-PVHSPELEAIPLLTESLALVVAQHHPLAVHEQVA 182

Query: 183 WDELGDIPLGLLSKGMHYRQSLDLSFRSRGLEPNAVLESDSSFQLIQAINTGICCAIMPL 242
              L D  L LLS     R+ +D      GL P  V+E++S   +++ I       ++P 
Sbjct: 183 LSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLP- 241

Query: 243 DCGLEDLSEHLRIVPVADAAIHSPVGLLLRRSEPRSAIAE 282
              +    + L+ + +A   +     LL R++  ++A A+
Sbjct: 242 -AAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAK 280